Neuronal population coding of movement direction, Science, vol.233, pp.1416-1419, 1986. ,
Neural population coding: combining insights from microscopic and mass signals, Trends Cogn. Sci, vol.19, pp.162-172, 2015. ,
Scanning the horizon: towards transparent and reproducible neuroimaging research, Nat. Rev. Neurosci, vol.18, pp.115-126, 2017. ,
URL : https://hal.archives-ouvertes.fr/cea-01896468
In vivo imaging of neural activity, Nat. Methods, vol.14, pp.349-359, 2017. ,
Genetic strategies to access activated neurons, Curr. Opin. Neurobiol, vol.45, pp.121-129, 2017. ,
, Neuronal Dynamics Regulating Brain and Behavioral State Transitions, Cell, vol.177, pp.970-985, 2019.
, Volumetric Ca2+ Imaging in the Mouse Brain Using Hybrid Multiplexed Sculpted Light Microscopy, Cell, vol.177, pp.1050-1066, 2019.
Discrete neocortical dynamics predict behavioral categorization of sounds, Neuron, vol.76, pp.435-449, 2012. ,
Cellular and circuit mechanisms of olfactory associative learning in Drosophila, J. Neurogenet, pp.1-11, 2020. ,
A map of olfactory representation in the Drosophila mushroom body, Cell, vol.128, pp.1205-1217, 2007. ,
Coordinated and Compartmentalized Neuromodulation Shapes Sensory Processing in Drosophila, Cell, vol.163, pp.1742-1755, 2015. ,
Heterosynaptic Plasticity Underlies Aversive Olfactory Learning in Drosophila, Neuron, vol.88, pp.985-998, 2015. ,
A connectome of a learning and memory center in the adult Drosophila brain, Elife, vol.6, 2017. ,
A Connectome of the Adult Drosophila Central Brain, 2020. ,
The neuronal architecture of the mushroom body provides a logic for associative learning, Elife, vol.3, p.4577, 2014. ,
Drosophila olfactory memory: single genes to complex neural circuits, Nat. Rev. Neurosci, vol.8, pp.341-354, 2007. ,
Decoding olfaction in Drosophila, Curr. Opin. Neurobiol, vol.13, pp.103-110, 2003. ,
Optical calcium imaging in the nervous system of Drosophila melanogaster, Biochim. Biophys. Acta, vol.1820, pp.1169-1178, 2012. ,
Cellular-resolution population imaging reveals robust sparse coding in the Drosophila mushroom body, J. Neurosci, vol.31, pp.11772-11785, 2011. ,
Olfactory network dynamics and the coding of multidimensional signals, Nat. Rev. Neurosci, vol.3, pp.884-895, 2002. ,
Genealogical correspondence of mushroom bodies across invertebrate phyla, Curr. Biol, vol.25, pp.38-44, 2015. ,
The molecular biology of memory: cAMP, PKA, CRE, CREB-1, CREB-2, and CPEB, Mol. Brain, vol.5, p.14, 2012. ,
The role of cAMP response element-binding protein in Drosophila long-term memory, J. Neurosci, vol.24, pp.8823-8828, 2004. ,
URL : https://hal.archives-ouvertes.fr/hal-00121840
Spinning-disk confocal microscopy-a cutting-edge tool for imaging of membrane traffic, Cell Struct. Funct, vol.27, pp.349-355, 2002. ,
Olfactory information processing in the Drosophila antennal lobe: anything goes?, J. Neurosci, vol.28, pp.13075-13087, 2008. ,
Optimal error bounds for cubic spline interpolation, Journal of Approximation Theory, vol.16, pp.105-122, 1976. ,
Point set registration: coherent point drift, IEEE Trans. Pattern Anal. Mach. Intell, vol.32, pp.2262-2275, 2010. ,
A density-based algorithm for discovering clusters in large spatial databases with noise, In Kdd, vol.96, pp.226-231, 1996. ,
Two independent mushroom body output circuits retrieve the six discrete components of Drosophila aversive memory, Cell Rep, vol.11, pp.1280-1292, 2015. ,
Genetic dissection of consolidated memory in Drosophila, Cell, vol.79, pp.35-47, 1994. ,
A late-phase, long-term memory trace forms in the ? neurons of Drosophila mushroom bodies after olfactory classical conditioning, J. Neurosci, vol.30, pp.16699-16708, 2010. ,
Drosophila alpha/beta mushroom body neurons form a branch-specific, long-term cellular memory trace after spaced olfactory conditioning, Neuron, vol.52, pp.845-855, 2006. ,
A novel cell nuclei segmentation method for 3D C. elegans embryonic time-lapse images, BMC Bioinformatics, vol.14, p.328, 2013. ,
It's all about timing, Cell, vol.139, pp.23-25, 2009. ,
Performance and sensitivity evaluation of 3D spot detection methods in confocal microscopy, Cytometry A, vol.87, pp.759-772, 2015. ,
Extraction of spots in biological images using multiscale products, Pattern Recognit, vol.35, 1989. ,
Quantification of fluorescent spots in time series of 3D confocal microscopy images of endoplasmic reticulum exit sites based on the HMAX transform, Medical Imaging 2010: Biomedical Applications in Molecular, Structural, and Functional Imaging, vol.7626, 2010. ,
, Suite2p: beyond 10,000 neurons with standard two-photon microscopy. bioRxiv 061507, 2017.
Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data, Neuron, vol.89, pp.285-299, 2016. ,
Nonrigid image registration in shared-memory multiprocessor environments with application to brains, breasts, and bees, IEEE Trans. Inf. Technol. Biomed, vol.7, pp.16-25, 2003. ,
The Insight ToolKit image registration framework, Front. Neuroinform, vol.8, p.44, 2014. ,
Long-Term Memory Engram Cells Are Established by c-Fos/CREB Transcriptional Cycling, Cell Rep, vol.25, pp.2716-2728, 2018. ,
Selective suppression and recall of long-term memories in Drosophila, PLoS Biol, vol.17, p.3000400, 2019. ,
Shifting transcriptional machinery is required for long-term memory maintenance and modification in Drosophila mushroom bodies, Nat. Commun, vol.7, p.13471, 2016. ,
Engrams and circuits crucial for systems consolidation of a memory, Science, vol.356, pp.73-78, 2017. ,
Sites of neocortical reorganization critical for remote spatial memory, Science, vol.305, pp.96-99, 2004. ,
Genetic Dissection of Neural Circuits: A Decade of Progress, Neuron, vol.98, p.865, 2018. ,
The Hungarian method for the assignment problem, Naval Research Logistics Quarterly, vol.2, pp.83-97, 1955. ,
Multiple hypothesis tracking for cluttered biological image sequences, IEEE Trans. Pattern Anal. Mach. Intell, vol.35, pp.2736-3750, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-02286646
TrackMate: An open and extensible platform for single-particle tracking, Methods, vol.115, pp.80-90, 2017. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01799353
Objective comparison of particle tracking methods, Nat. Methods, vol.11, pp.281-289, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-00932869
Fiji: an open-source platform for biological-image analysis, Nat. Methods, vol.9, pp.676-682, 2012. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02616466
A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data, Pharmacogenomics J, vol.10, pp.278-291, 2010. ,
Statistical methods for analysis of high-throughput RNA interference screens, Nat. Methods, vol.6, pp.569-575, 2009. ,