Brian2GeNN: accelerating spiking neural network simulations with graphics hardware - Archive ouverte HAL Access content directly
Journal Articles Scientific Reports Year : 2020

Brian2GeNN: accelerating spiking neural network simulations with graphics hardware

(1) , (2) , (3)
1
2
3

Abstract

"Brian" is a popular Python-based simulator for spiking neural networks, commonly used in computational neuroscience. GeNN is a C++-based meta-compiler for accelerating spiking neural network simulations using consumer or high performance grade graphics processing units (GPUs). Here we introduce a new software package, Brian2GeNN, that connects the two systems so that users can make use of GeNN GPU acceleration when developing their models in Brian, without requiring any technical knowledge about GPUs, C++ or GeNN. The new Brian2GeNN software uses a pipeline of code generation to translate Brian scripts into C++ code that can be used as input to GeNN, and subsequently can be run on suitable NVIDIA GPU accelerators. From the user's perspective, the entire pipeline is invoked by adding two simple lines to their Brian scripts. We have shown that using Brian2GeNN, two non-trivial models from the literature can run tens to hundreds of times faster than on CPU.
Fichier principal
Vignette du fichier
s41598-019-54957-7.pdf (1.99 Mo) Télécharger le fichier
Origin : Publication funded by an institution
Loading...

Dates and versions

inserm-02490884 , version 1 (25-02-2020)

Identifiers

Cite

Marcel Stimberg, Dan F M Goodman, Thomas Nowotny. Brian2GeNN: accelerating spiking neural network simulations with graphics hardware. Scientific Reports, 2020, 10 (1), pp.410. ⟨10.1038/s41598-019-54957-7⟩. ⟨inserm-02490884⟩
42 View
40 Download

Altmetric

Share

Gmail Facebook Twitter LinkedIn More