Same Data - Different Software - Different Results? Analytic Variability of Group fMRI Results

Alexander Bowring 1 Thomas E. Nichols 1 Camille Maumet 2
2 VisAGeS - Vision, Action et Gestion d'informations en Santé
INSERM - Institut National de la Santé et de la Recherche Médicale : U1228, Inria Rennes – Bretagne Atlantique , IRISA_D5 - SIGNAUX ET IMAGES NUMÉRIQUES, ROBOTIQUE
Abstract : A plethora of tools and techniques are now available to process and model fMRI data. However, this ‘methodological plurality’ has come with a drawback. Application of different analysis pipelines (Carp, 2012), alterations in software version (Glatard, 2015), and even changes in operating system (Gronenschild, 2012) have all been shown to cause variation in the results of a neuroimaging study. This high analytic flexibility has been pinpointed as a key factor that can lead to increased false-positives (Ioannidis, 2005), and compounded with a lack of data sharing, irreproducible research findings (Poldrack, 2017). In this work, we seek to understand how choice of software package impacts analysis results. We reproduce the results of three published neuroimaging studies (Schonberg, 2012; Moran, 2012; Padmanabhan, 2011) with publicly available data within the three main neuroimaging software packages: AFNI, FSL and SPM, using parametric and nonparametric inference. All information for how to process, analyze, and model each dataset we obtain from the publication. We make a variety of comparisons to assess the similarity of our results across both software packages and choice of inference method.
Document type :
Conference papers
Complete list of metadatas

Cited literature [11 references]  Display  Hide  Download

https://www.hal.inserm.fr/inserm-01933019
Contributor : Camille Maumet <>
Submitted on : Friday, November 23, 2018 - 4:22:10 PM
Last modification on : Monday, March 4, 2019 - 2:07:43 PM

File

Bowring_OHBM2018.pdf
Files produced by the author(s)

Identifiers

  • HAL Id : inserm-01933019, version 1

Citation

Alexander Bowring, Thomas E. Nichols, Camille Maumet. Same Data - Different Software - Different Results? Analytic Variability of Group fMRI Results. OHBM 2018 - 24th Annual Meeting of the Organization for Human Brain Mapping, Jun 2018, Singapore, Singapore. pp.1-3. ⟨inserm-01933019⟩

Share

Metrics

Record views

81

Files downloads

100