L. Schlegel, F. Grimont, and E. Ageron, Reappraisal of the taxonomy of the Streptococcus bovis/Streptococcus equinus complex and related species: description of Streptococcus gallolyticus subsp. gallolyticus subsp. nov., S. gallolyticus subsp. macedonicus subsp. nov. and S. gallolyticus subsp. pasteurianus subsp. nov., INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, vol.53, issue.3, pp.631-676, 2003.
DOI : 10.1099/ijs.0.02361-0

A. , V. Gelder, M. Swinkels, and D. , Clinical importance of Streptococcus gallolyticus infection among colorectal cancer patients: systematic review and meta-analysis, Clin Infect Dis, vol.53, pp.870-878, 2011.

C. Vogkou, N. Vlachogiannis, and L. Palaiodimos, The causative agents in infective endocarditis: a systematic review comprising 33,214 cases, European Journal of Clinical Microbiology & Infectious Diseases, vol.77, issue.8, pp.1227-1272, 2016.
DOI : 10.1253/circj.CJ-12-1101
URL : http://researchonline.lshtm.ac.uk/2697431/3/IE-MANUSCRIPT_R1_clean%20%281%29.pdf

J. Corredoira, R. Rabunal, and M. Alonso, Streptococcus bovis: 100 Years of an Intriguing Pathogen, Clinical Microbiology Newsletter, vol.39, issue.1, pp.1-9, 2017.
DOI : 10.1016/j.clinmicnews.2016.12.001

R. Leclercq, C. Huet, and M. Picherot, Genetic Basis of Antibiotic Resistance in Clinical Isolates of Streptococcus gallolyticus (Streptococcus bovis), Antimicrobial Agents and Chemotherapy, vol.49, issue.4, pp.1646-1654, 2005.
DOI : 10.1128/AAC.49.4.1646-1648.2005
URL : https://hal.archives-ouvertes.fr/hal-00020013

L. Baddour, W. Wilson, and A. Bayer, Infective Endocarditis in Adults: Diagnosis, Antimicrobial Therapy, and Management of Complications, Circulation, vol.132, issue.15, pp.1435-86, 2015.
DOI : 10.1161/CIR.0000000000000296
URL : http://circ.ahajournals.org/content/circulationaha/132/15/1435.full.pdf

C. Rusniok, E. Couvé, D. Cunha, and V. , Genome Sequence of Streptococcus gallolyticus: Insights into Its Adaptation to the Bovine Rumen and Its Ability To Cause Endocarditis, Journal of Bacteriology, vol.192, issue.8, pp.2266-76, 2010.
DOI : 10.1128/JB.01659-09

D. Hinse, T. Vollmer, and C. Rückert, Complete genome and comparative analysis of Streptococcus gallolyticus subsp. gallolyticus, an emerging pathogen of infective endocarditis, BMC Genomics, vol.46, issue.Pt 2, p.400, 2011.
DOI : 10.1016/0022-2836(87)90681-4
URL : https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/1471-2164-12-400?site=bmcgenomics.biomedcentral.com

I. Lin, T. Liu, and Y. Teng, Sequencing and Comparative Genome Analysis of Two Pathogenic Streptococcus gallolyticus Subspecies: Genome Plasticity, Adaptation and Virulence, PLoS ONE, vol.191, issue.Pt 4, p.20519, 2011.
DOI : 10.1371/journal.pone.0020519.s012
URL : https://doi.org/10.1371/journal.pone.0020519

C. Jans, L. Meile, and C. Lacroix, Genomics, evolution, and molecular epidemiology of the Streptococcus bovis/Streptococcus equinus complex (SBSEC), Infection, Genetics and Evolution, vol.33, pp.419-455, 2015.
DOI : 10.1016/j.meegid.2014.09.017

S. Kambarev and C. Caté, Draft genome sequence of erythromycin-resistant Streptococcus gallolyticus subsp. gallolyticus NTS 31106099 isolated from a patient with infective endocarditis and colorectal cancer, Genome Announc, vol.3, p.3, 2015.

S. Kambarev, F. Pecorari, and S. Corvec, Draft genome sequences of two highly erythromycin-resistant Streptococcus gallolyticus subsp. gallolyticus isolates containing a novel Tn916-like element, Tn6331, Genome Announc, vol.5, pp.17-26, 2017.
URL : https://hal.archives-ouvertes.fr/inserm-01550034

M. Brouwer, P. Warburton, and A. Roberts, Genetic Organisation, Mobility and Predicted Functions of Genes on Integrated, Mobile Genetic Elements in Sequenced Strains of Clostridium difficile, PLoS ONE, vol.44, issue.8, p.23014, 2011.
DOI : 10.1371/journal.pone.0023014.s004

A. Roberts, P. Mullany, and M. Wilson, [6] Gene transfer in bacterial biofilms, Methods Enzymol, vol.336, pp.60-65, 2001.
DOI : 10.1016/S0076-6879(01)36578-3

S. Flannagan, L. Zitzow, and Y. Su, Nucleotide Sequence of the 18-kb Conjugative Transposon Tn916 from Enterococcus faecalis, Plasmid, vol.32, issue.3, pp.350-354, 1994.
DOI : 10.1006/plas.1994.1077

M. Sebaihia, B. Wren, and P. Mullany, The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome, Nature Genetics, vol.21, issue.7, pp.779-86, 2006.
DOI : 10.1093/bioinformatics/bti553

. Kambarev,

, Tn916 family of mobile genetic elements, Trends Microbiol, vol.17, pp.251-259, 2009.

A. Roberts, M. Chandler, and P. Courvalin, Revised nomenclature for transposable genetic elements, Plasmid, vol.60, issue.3, pp.167-73, 2008.
DOI : 10.1016/j.plasmid.2008.08.001
URL : https://hal.archives-ouvertes.fr/hal-00356030

G. Werner, B. Hildebrandt, and W. Witte, Aminoglycoside-Streptothricin Resistance Gene Cluster aadE-sat4-aphA-3 Disseminated among Multiresistant Isolates of Enterococcus faecium, Antimicrobial Agents and Chemotherapy, vol.45, issue.11, pp.3267-3276, 2001.
DOI : 10.1128/AAC.45.11.3267-3269.2001

F. Schwarz, V. Perreten, and M. Teuber, Sequence of the 50-kb Conjugative Multiresistance Plasmid pRE25 from Enterococcus faecalis RE25, Plasmid, vol.46, issue.3, pp.170-87, 2001.
DOI : 10.1006/plas.2001.1544

I. Cochetti, E. Tili, and M. Vecchi, New Tn916-related elements causing erm(B)-mediated erythromycin resistance in tetracycline-susceptible pneumococci, Journal of Antimicrobial Chemotherapy, vol.49, issue.1, pp.127-158, 2007.
DOI : 10.1128/AAC.49.6.2454-2459.2005

H. Scornec, X. Bellanger, and H. Guilloteau, Inducibility of Tn916 conjugative transfer in Enterococcus faecalis by subinhibitory concentrations of ribosome-targeting antibiotics, Journal of Antimicrobial Chemotherapy, vol.69, issue.10, pp.2722-2730, 2017.
DOI : 10.1038/ja.2015.145
URL : https://hal.archives-ouvertes.fr/hal-01767795

, Novel Tn916-like elements in Streptococcus gallolyticus JAC