Shanoir: Applying the Software as a Service Distribution Model to Manage Brain Imaging Research Repositories

Christian Barillot 1, * Elise Bannier 1, 2 Olivier Commowick 1 Isabelle Corouge 1 Anthony Baire 1 Ines Fackfack 1 Justine Guillaumont 1 Yao Yao 1 Michael Kain 1
* Corresponding author
1 VisAGeS - Vision, Action et Gestion d'informations en Santé
INSERM - Institut National de la Santé et de la Recherche Médicale : U746, Inria Rennes – Bretagne Atlantique , IRISA-D5 - SIGNAUX ET IMAGES NUMÉRIQUES, ROBOTIQUE
2 Département de Radiologie [CHU de Rennes]
Abstract : Two of the major concerns of researchers and clinicians performing neuroimaging experiments are managing the huge quantity and diversity of data and the ability to compare their experiments and the programs they develop with those of their peers. In this context, we introduce Shanoir, which uses a type of cloud computing known as software as a service (SaaS) to manage neuroimaging data used in the clinical neurosciences. Thanks to a formal model of medical imaging data (an ontology), Shanoir provides an open source neuroinformatics environment designed to structure, manage, archive, visualize and share neuroimaging data with an emphasis on managing multi-institutional, collaborative research projects. This article covers how images are accessed through the Shanoir Data Management System and describes the data repositories that are hosted and managed by the Shanoir environment in different contexts.
Keywords : shared repositories centralized resources Neuroimaging database data sharing neuroinformatics software as a service (SaaS) cloud computing web application Java web services
Document type :
Journal articles
Complete list of metadatas

Cited literature [39 references]  Display  Hide  Download
https://www.hal.inserm.fr/inserm-01404864
Contributor : Christian Barillot <>
Submitted on : Tuesday, November 29, 2016 - 12:28:44 PM
Last modification on : Monday, August 5, 2019 - 5:56:07 PM
Long-term archiving on : Monday, March 27, 2017 - 8:02:43 AM

File

Shanoir_Frontiers_final.pdf
Files produced by the author(s)

Identifiers

Collections

INSTITUT-TELECOM | UNIV-RENNES1 | INRIA | IRISA | UR1-UFR-ISTIC | UNIV-RENNES | IRISA-D5

Citation

Christian Barillot, Elise Bannier, Olivier Commowick, Isabelle Corouge, Anthony Baire, et al.. Shanoir: Applying the Software as a Service Distribution Model to Manage Brain Imaging Research Repositories. Frontiers in information and communication technologies, Frontiers Media S.A., 2016, MAPPING: MAnagement and Processing of Images for Population ImagiNG, ⟨10.3389/fict.2016.00025⟩. ⟨inserm-01404864⟩

Export

BibTeX TEI DC DCterms EndNote

Share

Metrics

Record views

881

Files downloads

999

Contact

CCSD