V. Katju, In with the Old, in with the New: The Promiscuity of the Duplication Process Engenders Diverse Pathways for Novel Gene Creation, International Journal of Evolutionary Biology, vol.19, issue.12, pp.341932-23008799, 2012.
DOI : 10.1073/pnas.0706056104

K. Saunier, J. Barreaud, J. Eggen, R. Oriol, and H. Levéziel, Organization of the Bovine ??2-Fucosyltransferase Gene Cluster Suggests that the Sec1 Gene Might Have Been Shaped Through a Nonautonomous L1-Retrotransposition Event Within the Same Locus, Molecular Biology and Evolution, vol.18, issue.11, pp.2083-2091, 2001.
DOI : 10.1093/oxfordjournals.molbev.a003749

J. Abrantes, D. Posada, P. Guillon, P. Esteves, L. Pendu et al., Widespread Gene Conversion of Alpha-2-Fucosyltransferase Genes in Mammals, Journal of Molecular Evolution, vol.139, issue.1, pp.22-31, 2009.
DOI : 10.1007/s00239-009-9239-0

R. Oriol, J. Candelier, and R. Mollicone, Molecular genetics of H, Vox Sang, vol.78, pp.105-118, 2000.

P. Apoil, F. Roubinet, S. Despiau, R. Mollicone, and R. Oriol, Evolution of ??2-Fucosyltransferase Genes in Primates: Relation Between an Intronic Alu-Y Element and Red Cell Expression of ABH Antigens, Molecular Biology and Evolution, vol.17, issue.3, pp.337-351, 2000.
DOI : 10.1093/oxfordjournals.molbev.a026314

V. Bureau, S. Marionneau, A. Cailleau-thomas, L. Moullac-vaydie, B. Liehr et al., Comparison of the three rat GDP-L-fucose:??-D-galactoside 2-??-L-fucosyltransferases FTA, FTB and FTC, European Journal of Biochemistry, vol.60, issue.Suppl. 27, pp.1006-1019, 2001.
DOI : 10.1046/j.1432-1327.2001.01962.x

B. Borges, T. Paiva, and M. Harada, Evolution of the SEC1 gene in New World monkey lineages (Primates, Platyrrhini), Genetics and Molecular Research, vol.7, issue.3, pp.663-678, 2008.
DOI : 10.4238/vol7-3gmr452

M. Iwamori and S. Domino, Tissue-specific loss of fucosylated glycolipids in mice with targeted deletion of alpha(1,2)fucosyltransferase genes, Biochemical Journal, vol.380, issue.1, pp.75-81, 2004.
DOI : 10.1042/bj20031668

R. Oriol, L. Pendu, J. Mollicone, and R. , Genetics of ABO, H, Lewis, X and Related Antigens, Vox Sanguinis, vol.27, issue.3, pp.161-171, 1986.
DOI : 10.1111/j.1423-0410.1986.tb01946.x

V. Ravn and E. Dabelsteen, Tissue distribution of histo-blood group antigens. Review article, APMIS, vol.108, issue.1, pp.1-28, 2000.
DOI : 10.1034/j.1600-0463.2000.d01-1.x

M. Amin, J. Ruth, C. Haas, A. Pakozdi, and P. Mansfield, H-2g, a glucose analog of blood group H antigen, mediates mononuclear cell recruitment via Src and phosphatidylinositol 3-kinase pathways, Arthritis & Rheumatism, vol.276, issue.3, pp.689-695, 2008.
DOI : 10.1002/art.23296

J. Garcia-vallejo, E. Van-liempt, P. Da-costa-martins, C. Beckers, and B. Van-het-hof, DC-SIGN mediates adhesion and rolling of dendritic cells on primary human umbilical vein endothelial cells through LewisY antigen expressed on ICAM-2, Molecular Immunology, vol.45, issue.8, pp.2359-2369, 2008.
DOI : 10.1016/j.molimm.2007.11.001

T. Moehler, S. Sauer, M. Witzel, M. Andrulis, and J. Garcia-vallejo, (CD174) in first endothelial cell-cell contacts during angiogenesis, Journal of Cellular Physiology, vol.278, issue.1, pp.27-36, 2008.
DOI : 10.1002/jcp.21285

J. St-john, C. Claxton, M. Robinson, F. Yamamoto, and S. Domino, Genetic manipulation of blood group carbohydrates alters development and pathfinding of primary sensory axons of the olfactory systems, Developmental Biology, vol.298, issue.2, pp.470-484, 2006.
DOI : 10.1016/j.ydbio.2006.06.052

S. Marionneau, A. Cailleau-thomas, J. Rocher, L. Moullac-vaidye, B. Ruvoën-clouet et al., ABH and Lewis histo-blood group antigens, a model for the meaning of oligosaccharide diversity in the face of a changing world, Biochimie, vol.83, issue.7, pp.565-573, 2001.
DOI : 10.1016/S0300-9084(01)01321-9

A. Stapleton, E. Nudelman, E. Clausen, S. Hakomori, I. Stamm et al., Binding of uropathogenic Escherichia coli R45 to glycolipids extracted from vaginal epithelial cells is dependent on histo-blood group secretor status., Journal of Clinical Investigation, vol.90, issue.3, pp.965-972, 1992.
DOI : 10.1172/JCI115973

G. Ruiz-palacios, L. Cervantes, P. Ramos, B. Chavez-munguia, and D. Newburg, Campylobacter jejuni Binds Intestinal H(O) Antigen (Fuc??1, 2Gal??1, 4GlcNAc), and Fucosyloligosaccharides of Human Milk Inhibit Its Binding and Infection, Journal of Biological Chemistry, vol.278, issue.16, pp.14112-14120, 2003.
DOI : 10.1074/jbc.M207744200

M. Tan and X. Jiang, Norovirus???host interaction: Multi-selections by human histo-blood group antigens, Trends in Microbiology, vol.19, issue.8, pp.382-388, 2011.
DOI : 10.1016/j.tim.2011.05.007

L. Hu, S. Crawford, R. Czako, N. Cortes-penfield, and D. Smith, Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen, Nature, vol.77, issue.7397, pp.256-259, 2012.
DOI : 10.1038/nature10996

Y. Liu, P. Huang, M. Tan, J. Biesiada, and J. Meller, Rotavirus VP8*: Phylogeny, Host Range, and Interaction with Histo-Blood Group Antigens, Journal of Virology, vol.86, issue.18, pp.9899-9910, 2012.
DOI : 10.1128/JVI.00979-12

S. Hitoshi, S. Kusunoki, I. Kanazawa, and S. Tsuji, Molecular Cloning and Expression of Two Types of Rabbit ??-Galactoside ??1,2-Fucosyltransferase, Journal of Biological Chemistry, vol.270, issue.15, pp.8844-8850, 1995.
DOI : 10.1074/jbc.270.15.8844

P. Guillon, N. Ruvöen-clouet, L. Moullac-vaidye, B. Marchandeau, S. et al., Association between expression of the H histo-blood group antigen, ??1,2fucosyltransferases polymorphism of wild rabbits, and sensitivity to rabbit hemorrhagic disease virus, Glycobiology, vol.19, issue.1, pp.21-28, 2009.
DOI : 10.1093/glycob/cwn098

K. Teshima and H. Innan, The Effect of Gene Conversion on the Divergence Between Duplicated Genes, Genetics, vol.166, issue.3, pp.1553-1560, 2004.
DOI : 10.1534/genetics.166.3.1553

S. Liu, H. Xue, B. Pu, and N. Quian, A new viral disease in rabbit, Anim Husb Vet Med, vol.16, pp.235-255, 1984.

J. Abrantes, W. Van-der-loo, L. Pendu, J. Esteves, and P. , Rabbit haemorrhagic disease (RHD) and rabbit haemorrhagic disease virus (RHDV): a review. Veterinary Research in press, pp.10-1186, 2011.
URL : https://hal.archives-ouvertes.fr/inserm-00689849

N. Ruvoën-clouet, J. Ganière, G. André-fontaine, D. Blanchard, and L. Pendu, Binding of Rabbit Hemorrhagic Disease Virus to Antigens of the ABH Histo-Blood Group Family, Journal of Virology, vol.74, issue.24, pp.11950-11954, 2000.
DOI : 10.1128/JVI.74.24.11950-11954.2000

N. Ruvöen-clouet, G. Belliot, L. Pendu, and J. , Noroviruses and histo-blood groups: the impact of common host genetic polymorphisms on virus transmission and evolution, Reviews in Medical Virology, vol.19, issue.7, pp.355-366, 2013.
DOI : 10.1002/rmv.1757

D. Ilver, A. Arnqvist, J. Ögren, I. Frick, and D. Kersulyte, Helicobacter pylori Adhesin Binding Fucosylated Histo-Blood Group Antigens Revealed by Retagging, Science, vol.279, issue.5349, pp.373-377, 1998.
DOI : 10.1126/science.279.5349.373

M. Azevedo, S. Eriksson, N. Mendes, J. Serpa, and C. Figueiredo, 612 Infection By Helicobacter pylori Expressing the BaBa Adhesin Is Influenced By the Secretor Phenotype, Gastroenterology, vol.134, issue.4, pp.308-316, 2008.
DOI : 10.1016/S0016-5085(08)60402-3

Y. Koda, M. Soejima, and H. Kimura, The polymorphisms of fucosyltransferases, Legal Medicine, vol.3, issue.1, pp.2-14, 2001.
DOI : 10.1016/S1344-6223(01)00005-0

A. Ferrer-admetlla, M. Sikora, H. Laayouni, A. Esteve, and F. Roubinet, A Natural History of FUT2 Polymorphism in Humans, Molecular Biology and Evolution, vol.26, issue.9, 1993.
DOI : 10.1093/molbev/msp108

L. Silva, A. Carvalho, P. Guillon, S. Seixas, and M. Azevedo, Infection-associated FUT2 (Fucosyltransferase 2) genetic variation and impact on functionality assessed by in vivo studies, Glycoconjugate Journal, vol.7, issue.1, pp.61-68, 2010.
DOI : 10.1007/s10719-009-9255-8

L. Pendu, J. Ruvöen-clouet, N. Kindberg, E. Svensson, and L. , Mendelian resistance to human norovirus infections, Seminars in Immunology, vol.18, issue.6, pp.375-386, 2006.
DOI : 10.1016/j.smim.2006.07.009

S. Hitoshi, S. Kusunoki, I. Kanazawa, and S. Tsuji, Molecular cloning and expression of a third type of rabbit GDP-L-fucose: b-D-galactoside 2-a-L-fucosyltransferase, J Biol Chem, vol.271, pp.16975-16981, 1996.

K. Nyström, L. Gall-recule, G. Grassi, P. Abrantes, J. Ruvoën-clouet et al., Histo-Blood Group Antigens act as attachment factors of Rabbit Hemorrhagic Disease Virus infection in a virus straindependent manner, PLoS Pathogens, vol.7, p.21901093, 2011.

L. Pendu, J. Cartron, J. Lemieux, R. , U. Oriol et al., The presence of at least two different H-blood group-related b-D-gal a-2-L-fucosyltransferases in human serum and the genetics of blood group H substances, Am J Hum Genet, vol.37, pp.749-760, 1985.

A. Sarnesto, T. Köhlin, O. Hindsgaul, J. Thurin, and M. Blaszczyk-thurin, Purification of the secretortype b-galactoside a1-2fucosyltransferase from human serum, J Biol Chem, vol.267, pp.2737-2744, 1992.

H. Masutani and H. Kimura, Purification and Characterization of Secretory-Type GDP-L-Fucose: ??-D-Galactoside 2-??-L-Fucosyltransferase from Human Gastric Mucosa1, The Journal of Biochemistry, vol.118, issue.3, pp.541-545, 1995.
DOI : 10.1093/oxfordjournals.jbchem.a124942

P. Esteves, D. Lanning, N. Ferrand, K. Knight, and S. Zhai, Allelic Variation at the VHa Locus in Natural Populations of Rabbit (Oryctolagus cuniculus, L.), The Journal of Immunology, vol.172, issue.2, pp.1044-1053, 2004.
DOI : 10.4049/jimmunol.172.2.1044

A. Surridge, W. Van-der-loo, J. Abrantes, M. Carneiro, and G. Hewitt, Diversity and evolutionary history of the MHC DQA gene in leporids, Immunogenetics, vol.13, issue.Pt 5, pp.515-525, 2008.
DOI : 10.1007/s00251-008-0309-z

J. Abrantes, H. Areal, and P. Esteves, Insights into the European rabbit (Oryctolagus cuniculus) innate immune system: genetic diversity of the toll-like receptor 3 (TLR3) in wild populations and domestic breeds, BMC Genetics, vol.14, issue.1, pp.73-83, 2013.
DOI : 10.1093/bioinformatics/btp187
URL : https://hal.archives-ouvertes.fr/inserm-00903843

A. Varki, J. Esko, K. Colley, A. Varki, R. Cummings et al., Cellular organization of localization, Essentials of Glycobiology, 2009.

K. Hashimoto, T. Madej, S. Bryant, and A. Panchenko, Functional States of Homooligomers: Insights from the Evolution of Glycosyltransferases, Journal of Molecular Biology, vol.399, issue.1, pp.196-206, 2010.
DOI : 10.1016/j.jmb.2010.03.059

A. Faik, M. Bar-peled, A. Derocher, W. Zeng, and R. Perrin, Biochemical Characterization and Molecular Cloning of an alpha -1,2-Fucosyltransferase That Catalyzes the Last Step of Cell Wall Xyloglucan Biosynthesis in Pea, Journal of Biological Chemistry, vol.275, issue.20, pp.15082-15089, 2000.
DOI : 10.1074/jbc.M000677200

V. Sousa, M. Costa, A. Palma, F. Enguita, and C. J. , Localization, purification and specificity of the full-length membrane-bound form of human recombinant ??1,3/4-fucosyltransferase from BHK-21B cells, Biochemical Journal, vol.357, issue.3, pp.803-810, 2001.
DOI : 10.1042/bj3570803

A. El-battari, M. Prorok, K. Angata, S. Mathieu, and M. Zerfaoui, Different glycosyltransferases are differentially processed for secretion, dimerization, and autoglycosylation, Glycobiology, vol.13, issue.12, pp.941-953, 2003.
DOI : 10.1093/glycob/cwg117

H. Ihara, Y. Ikeda, S. Koyota, T. Endo, and H. Honke, A catalytically inactive ??1,4-N-acetylglucosaminyltransferase III (GnT-III) behaves as a dominant negative GnT-III inhibitor, European Journal of Biochemistry, vol.120, issue.1, pp.193-201, 2002.
DOI : 10.1046/j.0014-2956.2001.02640.x

K. Matsunami, S. Miyagawa, K. Nakagawa, O. Hideaki, and R. Shirakura, Molecular cloning of pigGnT-I and I.2: An application to xenotransplantation, Biochemical and Biophysical Research Communications, vol.343, issue.3, pp.677-683, 2006.
DOI : 10.1016/j.bbrc.2006.03.017

F. Olson, M. Bäckström, H. Karlsson, J. Burchell, and G. Hansson, A MUC1 tandem repeat reporter protein produced in CHO-K1 cells has sialylated core 1 O-glycans and becomes more densely glycosylated if coexpressed with polypeptide-GalNAc-T4 transferase, Glycobiology, vol.15, issue.2, pp.177-191, 2005.
DOI : 10.1093/glycob/cwh158

J. Bellemare, M. Rouleau, M. Harvey, B. Têtu, and C. Guillemette, Alternative-splicing forms of the major phase II conjugating UGT1A gene negatively regulate glucuronidation in human carcinoma cell lines, The Pharmacogenomics Journal, vol.37, issue.5, pp.431-441, 2010.
DOI : 10.1038/tpj.2009.64

S. Hitoshi, N. Koijima, S. Kusunoki, J. Inokuchi, and I. Kanazawa, Expression of the ??-Galactoside ??1,2-Fucosyltransferase Gene Suppresses Axonal Outgrowth of Neuro2a Neuroblastoma Cells, Journal of Neurochemistry, vol.66, issue.4, pp.1633-1640, 1996.
DOI : 10.1046/j.1471-4159.1996.66041633.x

F. Wagner and W. Flegel, Polymorphism of the h allele and the population frequency of sporadic nonfunctional alleles, Transfusion, vol.37, issue.3, pp.284-290, 1997.
DOI : 10.1046/j.1537-2995.1997.37397240210.x

G. Queney, N. Ferrand, S. Marchandeau, M. Azevodo, and F. Mougel, Absence of a genetic bottleneck in a wild rabbit (Oryctolagus cuniculus) population exposed to a severe viral epizootic, Molecular Ecology, vol.16, issue.2, pp.1253-1264, 2000.
DOI : 10.1038/329328a0

G. Queney, N. Ferrand, S. Weiss, F. Mougel, and M. Monnerot, Stationary Distributions of Microsatellite Loci Between Divergent Population Groups of the European Rabbit (Oryctolagus cuniculus), Molecular Biology and Evolution, vol.18, issue.12, pp.2169-2178, 2001.
DOI : 10.1093/oxfordjournals.molbev.a003763

L. Gall-recule, G. Zwingelstein, F. Laurent, S. , D. Boisseron et al., Phylogenetic analysis of rabbit haemorrhagic disease virus in France between 1993 and 2000, and the characterisation of RHDV antigenic variants, Archives of Virology, vol.148, issue.1, pp.65-81, 2003.
DOI : 10.1007/s00705-002-0908-1

C. Matthee, B. Van-vuuren, D. Bell, and T. Robinson, A Molecular Supermatrix of the Rabbits and Hares (Leporidae) Allows for the Identification of Five Intercontinental Exchanges During the Miocene, Systematic Biology, vol.53, issue.3, pp.443-447, 2004.
DOI : 10.1080/10635150490445715

P. Esteves, D. Lanning, N. Ferrand, K. Knight, and S. Zhai, The evolution of the immunoglobulin heavy chain variable region (IgV H ) in Leporids: an unusual case of transspecies polymorphism, Immunogenetics, vol.163, issue.Database Issue, pp.874-882, 2005.
DOI : 10.1007/s00251-005-0022-0

W. Van-der-loo, J. Abrantes, and P. Esteves, Sharing of Endogenous Lentiviral Gene Fragments among Leporid Lineages Separated for More than 12 Million Years, Journal of Virology, vol.83, issue.5, pp.2386-2388, 2009.
DOI : 10.1128/JVI.01116-08

T. Hall, BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Nucl Acids Symp Ser, vol.41, pp.95-98, 1999.

S. Kosakovsky-pond and S. Frost, Datamonkey: rapid detection of selective pressure on individual sites of codon alignments, Bioinformatics, vol.21, issue.10, pp.2531-2533, 2005.
DOI : 10.1093/bioinformatics/bti320

W. Delport, A. Poon, S. Frost, and S. Kosakovsky-pond, Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology, Bioinformatics, vol.26, issue.19, pp.2455-2457, 2010.
DOI : 10.1093/bioinformatics/btq429

S. Kosakovsky-pond, D. Posada, M. Gravenor, C. Woelk, and S. Frost, GARD: a genetic algorithm for recombination detection, Bioinformatics, vol.22, issue.24, pp.3096-3098, 2006.
DOI : 10.1093/bioinformatics/btl474

K. Tamura, D. Peterson, N. Peterson, G. Stecher, and M. Nei, MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods, Molecular Biology and Evolution, vol.28, issue.10, 2011.
DOI : 10.1093/molbev/msr121