J. Abrantes, W. Van-der-loo, L. Pendu, J. Esteves, and P. , Rabbit haemorrhagic disease (RHD) and rabbit haemorrhagic disease virus (RHDV): a review, Veterinary Research, vol.43, issue.1, p.12, 2012.
DOI : 10.1016/S0168-1702(98)00144-0
URL : https://hal.archives-ouvertes.fr/inserm-00689849

D. Gavier-widén and T. Mörner, Epidemiology and diagnosis of the European brown hare syndrome in Scandinavian countries: a review, Rev Sci Tech, vol.10, pp.453-458, 1991.

L. Gall, G. Huguet, S. Vende, P. Vautherot, J. Rasschaert et al., European brown hare syndrome virus: molecular cloning and sequencing of the genome, Journal of General Virology, vol.77, issue.8, pp.1693-1697, 1996.
DOI : 10.1099/0022-1317-77-8-1693

P. Alves and K. Hackländer, Lagomorph species: geographical distribution and conservation status, Lagomorph Biology: Evolution, Ecology and Conservation, pp.395-405

A. Lavazza, M. Scicluna, and L. Capucci, Susceptibility of Hares and Rabbits to the European Brown Hare Syndrome Virus (EBHSV) and Rabbit Haemorrhagic Disease Virus (RHDV) under Experimental Conditions*, Journal of Veterinary Medicine, Series B, vol.68, issue.1-10, pp.401-410, 1996.
DOI : 10.1111/j.1439-0450.1996.tb00332.x

G. Puggioni, P. Cavadini, C. Maestrale, R. Scivoli, G. Botti et al., The new French 2010 Rabbit Hemorrhagic Disease Virus causes an RHD-like disease in the Sardinian Cape hare (Lepus capensis mediterraneus), Veterinary Research, vol.44, issue.1, p.96, 2013.
DOI : 10.1051/vetres/2010010

L. Gall-reculé, G. Zwingelstein, F. Boucher, S. , L. Normand et al., Detection of a new variant of rabbit haemorrhagic disease virus in France, Veterinary Record, vol.168, issue.5, pp.137-138, 2011.
DOI : 10.1136/vr.d697

K. Dalton, I. Nicieza, A. Balseiro, M. Muguerza, J. Rosell et al., Variant Rabbit Hemorrhagic Disease Virus in Young Rabbits, Spain, Emerging Infectious Diseases, vol.18, issue.12, pp.2009-2012, 2012.
DOI : 10.3201/eid1812.120341

A. Lopes, D. Gavier-widén, L. Gall-reculé, G. Esteves, P. Abrantes et al., Complete coding sequences of European brown hare syndrome virus (EBHSV) strains isolated in 1982 in Sweden, Archives of Virology, vol.69, issue.Pt 8, pp.2193-2196, 2013.
DOI : 10.1007/s00705-013-1714-7

A. Müller, J. Freitas, E. Silva, L. Gall-reculé, G. Zwingelstein et al., Evolution of rabbit haemorrhagic disease virus (RHDV) in the European rabbit (Oryctolagus cuniculus) from the Iberian Peninsula, Veterinary Microbiology, vol.135, issue.3-4, pp.368-373, 2009.
DOI : 10.1016/j.vetmic.2008.09.057

L. Gall-reculé, G. Zwingelstein, F. Laurent, S. De-boisséson, C. Portejoie et al., Phylogenetic analysis of rabbit haemorrhagic disease virus in France between 1993 and 2000, and the characterisation of RHDV antigenic variants, Archives of Virology, vol.148, issue.1, pp.65-81, 2003.
DOI : 10.1007/s00705-002-0908-1

J. Kovaliski, R. Sinclair, G. Mutze, D. Peacock, T. Strive et al., Molecular epidemiology of Rabbit Haemorrhagic Disease Virus in Australia: when one became many, Molecular Ecology, vol.29, issue.Suppl 2, pp.408-420, 2014.
DOI : 10.1111/mec.12596

K. Tamura, G. Stecher, D. Peterson, A. Filipski, and S. Kumar, MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0, Molecular Biology and Evolution, vol.30, issue.12, pp.2725-2729, 2013.
DOI : 10.1093/molbev/mst197

J. Abrantes, P. Esteves, C. Carmo, A. Müller, G. Thompson et al., Genetic characterization of the chemokine receptor CXCR4 gene in lagomorphs: comparison between the families Ochotonidae and Leporidae, International Journal of Immunogenetics, vol.88, issue.2, pp.111-117, 2008.
DOI : 10.1111/j.1744-313X.2007.00735.x

C. Carmo, P. Esteves, N. Ferrand, and W. Van-der-loo, Genetic variation at chemokine receptor CCR5 in leporids: alteration at the 2nd extracellular domain by gene conversion with CCR2 in Oryctolagus, but not in Sylvilagus and Lepus species, Immunogenetics, vol.77, issue.5446, pp.494-501, 2006.
DOI : 10.1007/s00251-006-0095-4

P. Esteves, P. Alves, N. Ferrand, and W. Van-der-loo, Restriction fragment alleles of the rabbit IGHG genes with reference to the rabbit IGHGCH2 or e locus polymorphism, Animal Genetics, vol.133, issue.4, pp.309-311, 2002.
DOI : 10.1021/bi000749m

J. Melo-ferreira, P. Boursot, F. Suchentrunk, N. Ferrand, and P. Alves, Invasion from the cold past: extensive introgression of mountain hare (Lepus timidus) mitochondrial DNA into three other hare species in northern Iberia, Molecular Ecology, vol.24, issue.8, pp.2459-2464, 2005.
DOI : 10.1017/S0952836902001425

P. Kerr, A. Kitchen, and E. Holmes, Origin and Phylodynamics of Rabbit Hemorrhagic Disease Virus, Journal of Virology, vol.83, issue.23, pp.12129-12138, 2009.
DOI : 10.1128/JVI.01523-09

A. Hicks and S. Duffy, One misdated sequence of rabbit hemorrhagic disease virus prevents accurate estimation of its nucleotide substitution rate, BMC Evolutionary Biology, vol.12, issue.1, p.74, 2012.
DOI : 10.1093/molbev/msq262

J. Abrantes, A. Lopes, K. Dalton, F. Parra, and P. Esteves, Detection of RHDVa on the Iberian Peninsula: isolation of an RHDVa strain from a Spanish rabbitry, Archives of Virology, vol.157, issue.Pt 1, pp.321-326, 2014.
DOI : 10.1007/s00705-013-1808-2

J. Abrantes, A. Lopes, K. Dalton, P. Melo, J. Correia et al., New variant of rabbit hemorrhagic disease virus, Portugal, Emerg Infect Dis, vol.19, pp.2012-20131900, 2013.

C. Calvete, P. Sarto, A. Calvo, F. Monroy, and J. Calvo, Could the new rabbit haemorrhagic disease virus variant (RHDVb) be fully replacing classical RHD strains in the Iberian Peninsula? World Rabbit Sci, p.91, 2014.

L. Palomo, J. Gisbert, and J. Blanco, Atlas y libro rojo de los mamíferos terrestres de España, Madrid: Dirección General para la Biodiversidad- SECEM-SECEMU, 2007.

J. Melo-ferreira, L. Farelo, H. Freitas, F. Suchentrunk, P. Boursot et al., Home-loving boreal hare mitochondria survived several invasions in Iberia: the relative roles of recurrent hybridisation and allele surfing, Heredity, vol.66, issue.3, pp.2014265-273
DOI : 10.1111/j.2006.0018-0661.01952.x

K. Nyström, L. Gall-reculé, G. Grassi, P. Abrantes, J. Ruvoën-clouet et al., Histo-Blood Group Antigens Act as Attachment Factors of Rabbit Hemorrhagic Disease Virus Infection in a Virus Strain-Dependent Manner, PLoS Pathogens, vol.24, issue.Pt 4, p.1002188, 2011.
DOI : 10.1371/journal.ppat.1002188.s010

C. Parrish, E. Holmes, D. Morens, E. Park, D. Burke et al., Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases, Microbiology and Molecular Biology Reviews, vol.72, issue.3, pp.457-470, 2008.
DOI : 10.1128/MMBR.00004-08

B. Longdon, J. Hadfield, C. Webster, D. Obbard, and F. Jiggins, Host Phylogeny Determines Viral Persistence and Replication in Novel Hosts, PLoS Pathogens, vol.125, issue.113, p.1002260, 2011.
DOI : 10.1371/journal.ppat.1002260.s015

N. Forrester, S. Moss, S. Turner, H. Schirrmeier, and E. Gould, Recombination in rabbit haemorrhagic disease virus: Possible impact on evolution and epidemiology, Virology, vol.376, issue.2, pp.390-396, 2008.
DOI : 10.1016/j.virol.2008.03.023