OntoVIP: An ontology for the annotation of object models used for medical image simulation. - Archive ouverte HAL Access content directly
Journal Articles Journal of Biomedical Informatics Year : 2014

OntoVIP: An ontology for the annotation of object models used for medical image simulation.

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Hugues Benoit-Cattin
Denis Friboulet
Carole Lartizien
Hervé Liebgott
Tristan Glatard

Abstract

This paper describes the creation of a comprehensive conceptualization of object models used in medical image simulation, suitable for major imaging modalities and simulators. The goal is to create an application ontology that can be used to annotate the models in a repository integrated in the Virtual Imaging Platform (VIP), to facilitate their sharing and reuse. Annotations make the anatomical, physiological and pathophysiological content of the object models explicit. In such an interdisciplinary context we chose to rely on a common integration framework provided by a foundational ontology, that facilitates the consistent integration of the various modules extracted from several existing ontologies, i.e. FMA, PATO, MPATH, RadLex and ChEBI. Emphasis is put on methodology for achieving this extraction and integration. The most salient aspects of the ontology are presented, especially the organization in model layers, as well as its use to browse and query the model repository.
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Dates and versions

inserm-01062371 , version 1 (09-09-2014)

Identifiers

Cite

Bernard Gibaud, Germain Forestier, Hugues Benoit-Cattin, Frédéric Cervenansky, Patrick Clarysse, et al.. OntoVIP: An ontology for the annotation of object models used for medical image simulation.. Journal of Biomedical Informatics, 2014, 52, pp.279-92. ⟨10.1016/j.jbi.2014.07.008⟩. ⟨inserm-01062371⟩
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