GPSy: a cross-species gene prioritization system for conserved biological processes--application in male gamete development.

We present gene prioritization system (GPSy), a cross-species gene prioritization system that facilitates the arduous but critical task of prioritizing genes for follow-up functional analyses. GPSy's modular design with regard to species, data sets and scoring strategies enables users to formulate queries in a highly flexible manner. Currently, the system encompasses 20 topics related to conserved biological processes including male gamete development discussed in this article. The web server-based tool is freely available at http://gpsy.genouest.org.

Domains

Quantitative Methods [q-bio.QM] Bioinformatics [q-bio.QM] Development Biology Reproductive Biology

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nar.gks380.full.pdf (3.27 Mo)

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https://www.hal.inserm.fr/inserm-00696905

Submitted on : Monday, May 14, 2012-10:11:29 AM

Last modification on : Friday, March 24, 2023-2:52:55 PM

Long-term archiving on: Wednesday, August 15, 2012-2:26:22 AM

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inserm-00696905 , version 1 (14-05-2012)

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HAL Id : inserm-00696905 , version 1
DOI : 10.1093/nar/gks380
PUBMED : 22570409

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Ramona Britto, Olivier Sallou, Olivier Collin, Grégoire Michaux, Michael Primig, et al.. GPSy: a cross-species gene prioritization system for conserved biological processes--application in male gamete development.. Nucleic Acids Research, 2012, 40 (W1), pp.W458-W465. ⟨10.1093/nar/gks380⟩. ⟨inserm-00696905⟩

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