R. Fayer, Taxonomy and species delimitation in Cryptosporidium, Experimental Parasitology, vol.124, issue.1, pp.90-97, 2009.
DOI : 10.1016/j.exppara.2009.03.005

M. Kenzie, W. Hoxie, N. Proctor, M. Gradus, M. Blair et al., A Massive Outbreak in Milwaukee of Cryptosporidium Infection Transmitted through the Public Water Supply, New England Journal of Medicine, vol.331, issue.3, pp.161-167, 1994.
DOI : 10.1056/NEJM199407213310304

O. Hara, S. Chen, and X. , The cell biology of cryptosporidium infection, Microbes Infect, vol.13, pp.721-730, 2011.

S. Caccio and E. Pozio, Advances in the epidemiology, diagnosis and treatment of cryptosporidiosis, Expert Review of Anti-infective Therapy, vol.4, issue.3, pp.429-443, 2006.
DOI : 10.1586/14787210.4.3.429

R. Chalmers and M. Giles, Zoonotic cryptosporidiosis in the UK - challenges for control, Journal of Applied Microbiology, vol.17, issue.5, pp.1487-1497, 2010.
DOI : 10.1111/j.1365-2672.2010.04764.x

P. Monis and R. Thompson, Cryptosporidium and Giardia-zoonoses: fact or fiction?, Infection, Genetics and Evolution, vol.3, issue.4, pp.233-244, 2003.
DOI : 10.1016/j.meegid.2003.08.003

A. Follet-dumoulin, K. Guyot, S. Duchatelle, B. Bourel, F. Guilbert et al., Involvement of Insects in the Dissemination of Cryptosporidium in the Environment, Journal of Eukaryotic Microbiology, vol.65, p.36, 2001.
DOI : 10.1111/j.1550-7408.2001.tb00445.x

R. Panciera, R. Thomassen, and F. Garner, Cryptosporidial infection in a calf, Vet Pathol, vol.8, pp.479-484, 1971.

D. Moore and D. Zeman, Cryptosporidiosis in neonatal calves: 277 cases (1986-1987), J Am Vet Med Assoc, vol.198, pp.1969-1971, 1991.

D. De-graaf, E. Vanopdenbosch, L. Ortega-mora, H. Abbassi, and J. Peeters, A review of the importance of cryptosporidiosis in farm animals, International Journal for Parasitology, vol.29, issue.8, pp.1269-1287, 1999.
DOI : 10.1016/S0020-7519(99)00076-4

R. Fayer and M. Santin, Cryptosporidium xiaoi n. sp. (Apicomplexa: Cryptosporidiidae) in sheep (Ovis aries), Veterinary Parasitology, vol.164, issue.2-4, pp.192-200, 2009.
DOI : 10.1016/j.vetpar.2009.05.011

G. Robinson, S. Wright, K. Elwin, S. Hadfield, F. Katzer et al., Re-description of Cryptosporidium cuniculus Inman and Takeuchi, 1979 (Apicomplexa: Cryptosporidiidae): Morphology, biology and phylogeny, International Journal for Parasitology, vol.40, issue.13, pp.1539-1548, 2010.
DOI : 10.1016/j.ijpara.2010.05.010

R. Fayer, M. Santin, and D. Macarisin, Cryptosporidium ubiquitum n. sp. in animals and humans, Veterinary Parasitology, vol.172, issue.1-2, pp.23-32, 2010.
DOI : 10.1016/j.vetpar.2010.04.028

R. Chalmers, R. Smith, K. Elwin, F. Clifton-hadley, and M. Giles, Epidemiology of anthroponotic and zoonotic human cryptosporidiosis in England and Wales, 2004???2006, Epidemiology and Infection, vol.14, issue.05, pp.700-712, 2004.
DOI : 10.1128/AEM.66.12.5492-5498.2000

F. Leoni, C. Amar, G. Nichols, S. Pedraza-diaz, and J. Mclauchlin, Genetic analysis of Cryptosporidium from 2414 humans with diarrhoea in England between 1985 and 2000, Journal of Medical Microbiology, vol.55, issue.6, pp.703-707, 2006.
DOI : 10.1099/jmm.0.46251-0

R. Fayer, M. Santin, J. Trout, and E. Greiner, Prevalence of species and genotypes of Cryptosporidium found in 1???2-year-old dairy cattle in the eastern United States, Veterinary Parasitology, vol.135, issue.2, pp.105-112, 2006.
DOI : 10.1016/j.vetpar.2005.08.003

M. Santin, J. Trout, L. Xiao, L. Zhou, E. Greiner et al., Prevalence and age-related variation of Cryptosporidium species and genotypes in dairy calves, Veterinary Parasitology, vol.122, issue.2, pp.103-117, 2004.
DOI : 10.1016/j.vetpar.2004.03.020

M. Santin, J. Trout, and R. Fayer, A longitudinal study of cryptosporidiosis in dairy cattle from birth to 2 years of age, Veterinary Parasitology, vol.155, issue.1-2, pp.15-23, 2008.
DOI : 10.1016/j.vetpar.2008.04.018

Y. Feng, Y. Ortega, G. He, P. Das, M. Xu et al., Wide geographic distribution of Cryptosporidium bovis and the deer-like genotype in bovines, Veterinary Parasitology, vol.144, issue.1-2, pp.1-9, 2007.
DOI : 10.1016/j.vetpar.2006.10.001

A. Muhid, I. Robertson, J. Ng, and U. Ryan, Prevalence of and management factors contributing to Cryptosporidium sp. infection in pre-weaned and post-weaned calves in Johor, Malaysia, Experimental Parasitology, vol.127, issue.2, pp.534-538, 2011.
DOI : 10.1016/j.exppara.2010.10.015

R. Langkjaer, H. Vigre, H. Enemark, and C. Maddox-hyttel, Molecular and phylogenetic characterization of Cryptosporidium and Giardia from pigs and cattle in Denmark, Parasitology, vol.3, issue.03, pp.339-350, 2007.
DOI : 10.1016/S0304-4017(02)00422-3

D. Lefay, M. Naciri, P. Poirier, and R. Chermette, Prevalence of Cryptosporidium infection in calves in France, Veterinary Parasitology, vol.89, issue.1-2, pp.1-9, 2000.
DOI : 10.1016/S0304-4017(99)00230-7

M. Naciri, M. Lefay, R. Mancassola, P. Poirier, and R. Chermette, Role of Cryptosporidium parvum as a pathogen in neonatal diarrhoea complex in suckling and dairy calves in France, Veterinary Parasitology, vol.85, issue.4, pp.245-257, 1999.
DOI : 10.1016/S0304-4017(99)00111-9

M. Brscic, L. Heutinck, M. Wolthuis-fillerup, N. Stockhofe, B. Engel et al., Prevalence of gastrointestinal disorders recorded at postmortem inspection in white veal calves and associated risk factors, Journal of Dairy Science, vol.94, issue.2, pp.853-863, 2011.
DOI : 10.3168/jds.2010-3480

K. Guyot, A. Follet-dumoulin, E. Lelievre, C. Sarfati, M. Rabodonirina et al., Molecular Characterization of Cryptosporidium Isolates Obtained from Humans in France, Journal of Clinical Microbiology, vol.39, issue.10, pp.3472-3480, 2001.
DOI : 10.1128/JCM.39.10.3472-3480.2001

L. Xiao, K. Alderisio, J. Limor, M. Royer, and A. Lal, Identification of Species and Sources of Cryptosporidium Oocysts in Storm Waters with a Small-Subunit rRNA-Based Diagnostic and Genotyping Tool, Applied and Environmental Microbiology, vol.66, issue.12, pp.5492-5498, 2000.
DOI : 10.1128/AEM.66.12.5492-5498.2000

W. Gatei, C. Hart, R. Gilman, P. Das, V. Cama et al., Development of a Multilocus Sequence Typing Tool for Cryptosporidium hominis, The Journal of Eukaryotic Microbiology, vol.53, issue.s1, pp.43-48, 2006.
DOI : 10.1128/CMR.17.1.72-97.2004

J. Quilez, C. Sanchez-acedo, E. Del-cacho, A. Clavel, and A. Causape, Prevalence of Cryptosporidium and Giardia infections in cattle in Arag??n (northeastern Spain), Veterinary Parasitology, vol.66, issue.3-4, pp.139-146, 1996.
DOI : 10.1016/S0304-4017(96)01015-1

F. Bendali, H. Bichet, F. Schelcher, and M. Sanaa, Pattern of diarrhoea in newborn beef calves in south-west France, Vet Res, vol.30, pp.61-74, 1999.
URL : https://hal.archives-ouvertes.fr/hal-00902557

M. Peng, M. Wilson, R. Holland, S. Meshnick, A. Lal et al., Genetic diversity of Cryptosporidium spp. in cattle in Michigan: implications for understanding the transmission dynamics, Parasitology Research, vol.67, issue.3, pp.175-180, 2003.
DOI : 10.1007/s00436-003-0834-5

A. Duranti, S. Caccio, E. Pozio, D. Egidio, A. et al., Infection in Cattle, Zoonoses and Public Health, vol.100, issue.4, pp.176-182, 2009.
DOI : 10.1111/j.1863-2378.2008.01173.x

C. Maddox-hyttel, R. Langkjaer, H. Enemark, and H. Vigre, Cryptosporidium and Giardia in different age groups of Danish cattle and pigs???Occurrence and management associated risk factors, Veterinary Parasitology, vol.141, issue.1-2, pp.48-59, 2006.
DOI : 10.1016/j.vetpar.2006.04.032

R. Huetink, J. Van-der-giessen, J. Noordhuizen, and H. Ploeger, Epidemiology of Cryptosporidium spp. and Giardia duodenalis on a dairy farm, Veterinary Parasitology, vol.102, issue.1-2, pp.53-67, 2001.
DOI : 10.1016/S0304-4017(01)00514-3

S. Khan, C. Debnath, A. Pramanik, L. Xiao, T. Nozaki et al., Molecular characterization and assessment of zoonotic transmission of Cryptosporidium from dairy cattle in West Bengal, India, Veterinary Parasitology, vol.171, issue.1-2, pp.41-47, 2001.
DOI : 10.1016/j.vetpar.2010.03.008

B. Singh, R. Sharma, H. Kumar, H. Banga, R. Aulakh et al., Prevalence of Cryptosporidium parvum infection in Punjab (India) and its association with diarrhea in neonatal dairy calves, Veterinary Parasitology, vol.140, issue.1-2, pp.162-165, 2006.
DOI : 10.1016/j.vetpar.2006.03.029

D. Feltus, C. Giddings, M. Khaitsa, and J. Mcevoy, High prevalence of Cryptosporidium bovis and the deer-like genotype in calves compared to mature cows in beef cow-calf operations, Veterinary Parasitology, vol.151, issue.2-4, pp.191-195, 2008.
DOI : 10.1016/j.vetpar.2007.10.012

B. Maikai, J. Umoh, J. Kwaga, I. Lawal, V. Maikai et al., Molecular characterization of Cryptosporidium spp. in native breeds of cattle in Kaduna State, Nigeria, Veterinary Parasitology, vol.178, issue.3-4, pp.241-245, 2011.
DOI : 10.1016/j.vetpar.2010.12.048

H. Thompson, J. Dooley, J. Kenny, M. Mccoy, C. Lowery et al., Genotypes and subtypes of Cryptosporidium spp. in neonatal calves in Northern Ireland, Parasitology Research, vol.41, issue.Suppl, pp.619-624, 2007.
DOI : 10.1007/s00436-006-0305-x

E. Brook, A. Hart, C. French, N. Christley, and R. , Molecular epidemiology of Cryptosporidium subtypes in cattle in England, The Veterinary Journal, vol.179, issue.3, pp.378-382, 2009.
DOI : 10.1016/j.tvjl.2007.10.023

Y. Feng, N. Li, L. Duan, and X. L. , Cryptosporidium Genotype and Subtype Distribution in Raw Wastewater in Shanghai, China: Evidence for Possible Unique Cryptosporidium hominis Transmission, Journal of Clinical Microbiology, vol.47, issue.1, pp.153-157, 2009.
DOI : 10.1128/JCM.01777-08

L. Xiao, Molecular epidemiology of cryptosporidiosis: An update, Experimental Parasitology, vol.124, issue.1, pp.80-89, 2010.
DOI : 10.1016/j.exppara.2009.03.018

C. Reed, G. Sturbaum, P. Hoover, and C. Sterling, Cryptosporidium parvum Mixed Genotypes Detected by PCR-Restriction Fragment Length Polymorphism Analysis, Applied and Environmental Microbiology, vol.68, issue.1, pp.427-429, 2002.
DOI : 10.1128/AEM.68.1.427-429.2002

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC126566

S. Tanriverdi, M. Arslan, D. Akiyoshi, S. Tzipori, and G. Widmer, Identification of genotypically mixed Cryptosporidium parvum populations in humans and calves, Molecular and Biochemical Parasitology, vol.130, issue.1, pp.13-22, 2003.
DOI : 10.1016/S0166-6851(03)00138-5

M. Jenikova, K. Nemejc, B. Sak, D. Kvetonova, and M. Kvac, New view on the age-specificity of pig Cryptosporidium by species-specific primers for distinguishing Cryptosporidium suis and Cryptosporidium pig genotype II, Veterinary Parasitology, vol.176, issue.2-3, pp.120-125, 2011.
DOI : 10.1016/j.vetpar.2010.11.010

M. Santin and D. Zarlenga, A multiplex polymerase chain reaction assay to simultaneously distinguish Cryptosporidium species of veterinary and public health concern in cattle, Veterinary Parasitology, vol.166, issue.1-2, pp.32-37, 2009.
DOI : 10.1016/j.vetpar.2009.07.039

R. Wang, H. Wang, Y. Sun, L. Zhang, F. Jian et al., Characteristics of Cryptosporidium Transmission in Preweaned Dairy Cattle in Henan, China, Journal of Clinical Microbiology, vol.49, issue.3, pp.1077-1082, 2011.
DOI : 10.1128/JCM.02194-10

R. Fayer, L. Gasbarre, P. Pasquali, A. Canals, A. S. Zarlenga et al., Cryptosporidium parvum infection in bovine neonates: dynamic clinical, parasitic and immunologic patterns, International Journal for Parasitology, vol.28, issue.1, pp.49-56, 1998.
DOI : 10.1016/S0020-7519(97)00170-7

J. Harp, D. Woodmansee, and H. Moon, Resistance of calves to Cryptosporidium parvum: effects of age and previous exposure, Infect Immun, vol.58, pp.2237-2240, 1990.

J. Peeters, I. Villacorta, E. Vanopdenbosch, D. Vandergheynst, M. Naciri et al., Cryptosporidium parvum in calves: kinetics and immunoblot analysis of specific serum and local antibody responses (immunoglobulin A [IgA], IgG, and IgM) after natural and experimental infections, Infect Immun, vol.60, pp.2309-2316, 1992.

R. Fayer, M. Santin, and X. L. , CRYPTOSPORIDIUM BOVIS N. SP. (APICOMPLEXA: CRYPTOSPORIDIIDAE) IN CATTLE (BOS TAURUS), Journal of Parasitology, vol.91, issue.3, pp.624-629, 2005.
DOI : 10.1645/GE-3435

L. Trotz-williams, D. Martin, W. Gatei, V. Cama, A. Peregrine et al., Genotype and subtype analyses of Cryptosporidium isolates from dairy calves and humans in Ontario, Parasitology Research, vol.17, issue.4, pp.346-352, 2006.
DOI : 10.1007/s00436-006-0157-4

E. Atwill, E. Johnson, D. Klingborg, G. Veserat, G. Markegard et al., Age, geographic, and temporal distribution of fecal shedding of Cryptosporidium parvum oocysts in cow-calf herds, Am J Vet Res, vol.60, pp.420-425, 1999.

M. Alves, L. Xiao, F. Antunes, and O. Matos, Distribution of Cryptosporidium subtypes in humans and domestic and wild ruminants in Portugal, Parasitology Research, vol.41, issue.3, pp.287-292, 2006.
DOI : 10.1007/s00436-006-0164-5

A. Jex and R. Gasser, Genetic richness and diversity in Cryptosporidium hominis and C. parvum reveals major knowledge gaps and a need for the application of ???next generation??? technologies ??? Research review, Biotechnology Advances, vol.28, issue.1, pp.17-26, 2010.
DOI : 10.1016/j.biotechadv.2009.08.003

B. Soba and J. Logar, Genetic classification of Cryptosporidium isolates from humans and calves in Slovenia, Parasitology, vol.8, issue.11, pp.1263-1270, 2008.
DOI : 10.1128/JCM.01067-06

P. Wielinga, A. De-vries, T. Van-der-goot, T. Mank, M. Mars et al., Molecular epidemiology of Cryptosporidium in humans and cattle in The Netherlands, International Journal for Parasitology, vol.38, issue.7, pp.809-817, 2008.
DOI : 10.1016/j.ijpara.2007.10.014