J. Latgé, Aspergillus fumigatus and aspergillosis, Clin Microbiol Rev, vol.12, pp.310-350, 1999.
DOI : 10.1128/9781555815523

J. Latgé, The pathobiology of Aspergillus fumigatus, Trends in Microbiology, vol.9, issue.8, pp.382-389, 2001.
DOI : 10.1016/S0966-842X(01)02104-7

D. Geiser, M. Klich, J. Frisvad, S. Peterson, J. Varga et al., The current status of species recognition and identification in Aspergillus, Studies in Mycology, vol.59, pp.1-10, 2007.
DOI : 10.3114/sim.2007.59.01

T. Hohl and M. Feldmesser, Aspergillus fumigatus: Principles of Pathogenesis and Host Defense, Eukaryotic Cell, vol.6, issue.11, pp.1953-1963, 2007.
DOI : 10.1128/EC.00274-07

A. Abad, J. Fernandez-molina, J. Bikandi, A. Ramirez, J. Margareto et al., What makes Aspergillus fumigatus a successful pathogen? Genes and molecules involved in invasive aspergillosis, Revista Iberoamericana de Micolog??a, vol.27, issue.4, pp.155-182, 2010.
DOI : 10.1016/j.riam.2010.10.003

S. Balajee, J. Gribskov, E. Hanley, D. Nickle, and K. Marr, Aspergillus lentulus sp. nov., a New Sibling Species of A. fumigatus, Eukaryotic Cell, vol.4, issue.3, pp.625-632, 2005.
DOI : 10.1128/EC.4.3.625-632.2005

G. Montenegro, S. Puch, V. Sanchez, M. Jewtuchowicz, M. Pinoni et al., Phenotypic and genotypic characterization of Aspergillus lentulus and Aspergillus fumigatus isolates in a patient with probable invasive aspergillosis, Journal of Medical Microbiology, vol.58, issue.3, pp.391-395, 2009.
DOI : 10.1099/jmm.0.005942-0

S. Balajee, D. Nickle, J. Varga, and K. Marr, Molecular Studies Reveal Frequent Misidentification of Aspergillus fumigatus by Morphotyping, Eukaryotic Cell, vol.5, issue.10, pp.1705-1712, 2006.
DOI : 10.1128/EC.00162-06

J. Staab, J. Kahn, and K. Marr, Differential Aspergillus lentulus Echinocandin Susceptibilities Are Fksp Independent, Antimicrobial Agents and Chemotherapy, vol.54, issue.12, pp.4992-4998, 2010.
DOI : 10.1128/AAC.00774-10
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2981225

W. Nierman, A. Pain, M. Anderson, J. Wortman, H. Kim et al., Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus, Genomic sequences of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus, pp.1151-1156, 2005.
DOI : 10.1038/nature04332

A. Shevchenko, O. Jensen, A. Podtelejniko, F. Sagliocco, M. Wilm et al., Linking genome and proteome by mass spectrometry: Large-scale identification of yeast proteins from two dimensional gels, Proceedings of the National Academy of Sciences, vol.93, issue.25, pp.14440-14445, 1996.
DOI : 10.1073/pnas.93.25.14440

O. Kniemeyer, F. Lessing, O. Scheibner, C. Hertweck, and A. Brakhage, Optimisation of a 2-D gel electrophoresis protocol for the human-pathogenic fungus Aspergillus fumigatus, Current Genetics, vol.2, issue.3, pp.178-189, 2006.
DOI : 10.1007/s00294-005-0047-9

J. Grinyer, M. Mckay, H. Nevalainem, and B. Herbert, Fungal proteomics: initial mapping of biological control strain Trichoderma harzianum, Current Genetics, vol.45, issue.3, pp.163-169, 2004.
DOI : 10.1007/s00294-003-0474-4

Y. Kim, M. Nandakumar, and M. Marten, Proteomics of filamentous fungi, Trends in Biotechnology, vol.25, issue.9, pp.395-400, 2007.
DOI : 10.1016/j.tibtech.2007.07.008

J. Hettick, B. Green, A. Buskirk, M. Kashon, J. Slaven et al., Discrimination of Aspergillus isolates at the species and strain level by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry fingerprinting, Analytical Biochemistry, vol.380, issue.2, pp.276-281, 2008.
DOI : 10.1016/j.ab.2008.05.051

J. Hettick, B. Green, A. Buskirk, M. Kashon, J. Slaven et al., isolates by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry fingerprinting, Rapid Communications in Mass Spectrometry, vol.20, issue.16, pp.2555-2560, 2008.
DOI : 10.1002/rcm.3649

Y. Kim, M. Nandakumar, and M. Marten, The state of proteome profiling in the fungus genus Aspergillus, Brief Funct Genomic Proteomic, vol.7, pp.780-783, 2008.

C. Marinach-patrice, A. Fekkar, R. Atanasova, J. Gomes, L. Djamdjian et al., Rapid Species Diagnosis for Invasive Candidiasis Using Mass Spectrometry, PLoS ONE, vol.5, issue.1, p.8862, 2010.
DOI : 10.1371/journal.pone.0008862.t002

T. Hutchens and T. Yip, New desorption strategies for the mass spectrometric analysis of macromolecules, Rapid Communications in Mass Spectrometry, vol.88, issue.7, pp.576-580, 1993.
DOI : 10.1002/rcm.1290070703

V. Seibert, A. Wiesner, T. Buschmann, and J. Meuer, Surface-enhanced laser desorption ionization time-of-flight mass spectrometry (SELDI TOF-MS) and ProteinChip?? technology in proteomics research, Pathology - Research and Practice, vol.200, issue.2, pp.83-94, 2004.
DOI : 10.1016/j.prp.2004.01.010

N. Tang, P. Tornatore, and S. Weinberger, Current developments in SELDI affinity technology, Mass Spectrometry Reviews, vol.298, issue.1, pp.34-44, 2004.
DOI : 10.1002/mas.10066

T. Poon, A. Hui, H. Chan, I. Ang, S. Chow et al., Prediction of Liver Fibrosis and Cirrhosis in Chronic Hepatitis B Infection by Serum Proteomic Fingerprinting: A Pilot Study, Clinical Chemistry, vol.51, issue.2, pp.328-335, 2005.
DOI : 10.1373/clinchem.2004.041764

J. Engwegen, A. Gast, J. Schellens, and J. Beijnen, Clinical proteomics: searching for better tumour markers with SELDI-TOF mass spectrometry, Trends in Pharmacological Sciences, vol.27, issue.5, pp.251-259, 2006.
DOI : 10.1016/j.tips.2006.03.003

M. Abromovitz, L. , and B. , A system approach to clinical oncology: focus on breast cancer, Proteome Sci, vol.4, pp.1-15, 2006.

E. Seibold, R. Bogumil, S. Vorderwürlbecke, A. Dahouk, S. Buckendhahl et al., at the level of subspecies and individual strains, FEMS Immunology & Medical Microbiology, vol.49, issue.3, pp.364-373, 2007.
DOI : 10.1111/j.1574-695X.2007.00216.x

P. Gupta and K. Lee, Genomics and proteomics in process development: opportunities and challenges, Trends in Biotechnology, vol.25, issue.7, pp.324-330, 2007.
DOI : 10.1016/j.tibtech.2007.04.005

A. Hodgetts, M. Levin, J. Kroll, and P. Langforgd, Biomarker discovery in infectious diseases using SELDI, Future Microbiology, vol.2, issue.1, pp.35-49, 2007.
DOI : 10.2217/17460913.2.1.35

A. Bouamrani, C. Ramus, E. Gay, L. Pelletier, M. Cubizolles et al., Increased Phosphorylation of Vimentin in Noninfiltrative Meningiomas, PLoS ONE, vol.269, issue.2, pp.5-9238, 2010.
DOI : 10.1371/journal.pone.0009238.t002
URL : https://hal.archives-ouvertes.fr/inserm-00514192

Z. He, H. Zhong, Y. Hu, S. Xiao, and J. Xu, Analysis of differential protein expression in Acidithiobacillus ferrooxidans grown under different energy resources respectively using SELDI-ProteinChip technologies, Journal of Microbiological Methods, vol.65, issue.1, pp.10-20, 2006.
DOI : 10.1016/j.mimet.2005.06.006

J. Stiles, J. Whittaker, B. Sarfo, W. Thompson, M. Powell et al., Trypanosome apoptotic factor mediates apoptosis in human brain vascular endothelial cells, Molecular and Biochemical Parasitology, vol.133, issue.2, pp.229-240, 2004.
DOI : 10.1016/j.molbiopara.2003.10.011

D. Agranoff, A. Stich, P. Abel, and K. S. , Proteomic fingerprinting for the diagnosis of human African trypanosomiasis, Trends in Parasitology, vol.21, issue.4, pp.154-156, 2005.
DOI : 10.1016/j.pt.2005.02.003

M. Monod, O. Jousson, R. Utz, W. Latgé, and . Steinbach, Aspergillus fumigatus Secreted Proteases, Aspergillus fumigatus and Aspergillosis, pp.87-106
DOI : 10.1128/9781555815523.ch8

D. Hogan, Talking to Themselves: Autoregulation and Quorum Sensing in Fungi, Eukaryotic Cell, vol.5, issue.4, pp.613-619, 2006.
DOI : 10.1128/EC.5.4.613-619.2006

R. Bhabhra, M. Miley, E. Mylonakis, D. Boettner, J. Fortwendel et al., Disruption of the Aspergillus fumigatus Gene Encoding Nucleolar Protein CgrA Impairs Thermotolerant Growth and Reduces Virulence, Infection and Immunity, vol.72, issue.8, pp.4731-4740, 2004.
DOI : 10.1128/IAI.72.8.4731-4740.2004

J. Shankar, S. Nigam, S. Saxena, T. Madan, and P. Sarma, Identification and Assignment of Function to the Genes of Aspergillus fumigatus Expressed at 37 oC, The Journal of Eukaryotic Microbiology, vol.68, issue.4, pp.428-432, 2004.
DOI : 10.1038/35083594

D. Askew, Aspergillus fumigatus: virulence genes in a street-smart mold, Current Opinion in Microbiology, vol.11, issue.4, pp.331-337, 2008.
DOI : 10.1016/j.mib.2008.05.009

A. Taubitz, B. Bauer, J. Heeseman, and F. Ebel, Role of Respiration in the Germination Process of the Pathogenic Mold Aspergillus fumigatus, Current Microbiology, vol.21, issue.5, pp.354-360, 2007.
DOI : 10.1007/s00284-006-0413-y

S. Willger, S. Puttikamonkul, S. Kim, J. Burritt, N. Grahl et al., A Sterol-Regulatory Element Binding Protein Is Required for Cell Polarity, Hypoxia Adaptation, Azole Drug Resistance, and Virulence in Aspergillus fumigatus, PLoS Pathogens, vol.8, issue.3, p.1000200, 2008.
DOI : 10.1371/journal.ppat.1000200.s001

K. Oda, D. Kakizono, O. Yamada, H. Iefuji, O. Akita et al., Proteomic Analysis of Extracellular Proteins from Aspergillus oryzae Grown under Submerged and Solid-State Culture Conditions, Applied and Environmental Microbiology, vol.72, issue.5, pp.3448-3457, 2006.
DOI : 10.1128/AEM.72.5.3448-3457.2006

Y. Kim, M. Nandakumar, and M. Marten, Proteome map of Aspergillus nidulans during osmoadaptation, Fungal Genetics and Biology, vol.44, issue.9, pp.886-895, 2007.
DOI : 10.1016/j.fgb.2006.12.001

S. Egan, M. Lanigan, B. Shiell, G. Beddome, D. Stewart et al., The recovery of Mycobacterium avium subspecies paratuberculosis from the intestine of infected ruminants for proteomic evaluation, Journal of Microbiological Methods, vol.75, issue.1, pp.29-39, 2008.
DOI : 10.1016/j.mimet.2008.04.008

M. Pihet, P. Vandeputte, G. Tronchin, G. Renier, P. Saulnier et al., Melanin is an essential component for the integrity of the cell wall of Aspergillus fumigatus conidia, BMC Microbiology, vol.9, issue.1, p.177, 2009.
DOI : 10.1186/1471-2180-9-177
URL : https://hal.archives-ouvertes.fr/inserm-00668492

M. Kiehntopf, R. Siegmund, and T. Deufel, Abstract, Clinical Chemical Laboratory Medicine, vol.45, issue.11, pp.1435-1449, 2007.
DOI : 10.1515/CCLM.2007.351

S. Leaw, H. Chang, H. Sun, R. Barton, J. Bouchara et al., Identification of Medically Important Yeast Species by Sequence Analysis of the Internal Transcribed Spacer Regions, Journal of Clinical Microbiology, vol.44, issue.3, pp.693-699, 2006.
DOI : 10.1128/JCM.44.3.693-699.2006

. Pinel, Comparative proteomic profiles of Aspergillus fumigatus and Aspergillus lentulus strains by surface-enhanced laser desorption ionization time-of-flight mass spectrometry (SELDI-TOF-MS), BMC Microbiology, vol.11, issue.1, p.172, 2011.
DOI : 10.1128/JCM.44.3.693-699.2006
URL : https://hal.archives-ouvertes.fr/inserm-00617360