M. Ait-goughoulte, C. Hourioux, R. Patient, S. Trassard, D. Brand et al., Core protein cleavage by signal peptide peptidase is required for hepatitis C virus-like particle assembly, Journal of General Virology, vol.87, issue.4, pp.855-860, 2006.
DOI : 10.1099/vir.0.81664-0
URL : https://hal.archives-ouvertes.fr/inserm-00128751

H. Appleton and P. Higgins, VIRUSES AND GASTROENTERITIS IN INFANTS, The Lancet, vol.305, issue.7919, 1975.
DOI : 10.1016/S0140-6736(75)92581-7

S. Biel and D. Madeley, Diagnostic virology ??? the need for electron microscopy: a discussion paper, Journal of Clinical Virology, vol.22, issue.1, pp.1-9, 2001.
DOI : 10.1016/S1386-6532(01)00151-2

R. Bishop, G. Davidson, I. Holmes, and B. Ruck, VIRUS PARTICLES IN EPITHELIAL CELLS OF DUODENAL MUCOSA FROM CHILDREN WITH ACUTE NON-BACTERIAL GASTROENTERITIS, The Lancet, vol.302, issue.7841, pp.1281-1283, 1973.
DOI : 10.1016/S0140-6736(73)92867-5

E. Blanchard, C. Hourioux, D. Brand, M. Ait-goughoulte, A. Moreau et al., Hepatitis C Virus-Like Particle Budding: Role of the Core Protein and Importance of Its Asp111, Journal of Virology, vol.77, issue.18, pp.10131-10138, 2003.
DOI : 10.1128/JVI.77.18.10131-10138.2003

L. Bousarghin, A. Touze, P. Sizaret, and P. Coursaget, Human Papillomavirus Types 16, 31, and 58 Use Different Endocytosis Pathways To Enter Cells, Journal of Virology, vol.77, issue.6, pp.3846-3850, 2003.
DOI : 10.1128/JVI.77.6.3846-3850.2003

B. Brandenburg, L. Lee, M. Lakadamyali, M. Rust, and X. Zhuang, Imaging Poliovirus Entry in Live Cells, PLoS Biology, vol.239, issue.7, pp.1543-1555, 2007.
DOI : 10.1371/journal.pbio.0050183.sg002

B. Brandenburg and X. Zhuang, Virus trafficking ??? learning from single-virus tracking, Nature Reviews Microbiology, vol.15, issue.3, pp.197-208, 2007.
DOI : 10.1038/nrmicro1615

S. Brenner and R. Horne, A negative staining method for high resolution electron microscopy of viruses, Biochimica et Biophysica Acta, vol.34, pp.103-110, 1959.
DOI : 10.1016/0006-3002(59)90237-9

J. Briggs, K. Grunewald, B. Glass, F. Forster, H. Krausslich et al., The Mechanism of HIV-1 Core Assembly: Insights from Three-Dimensional Reconstructions of Authentic Virions, Structure, vol.14, issue.1, pp.15-20, 2006.
DOI : 10.1016/j.str.2005.09.010

K. Brorson, Y. Xu, P. Swann, E. Hamilton, M. Mustafa et al., Evaluation of a Quantitative Product-enhanced Reverse Transcriptase Assay to Monitor Retrovirus in mAb Cell-culture, Biologicals, vol.30, issue.1, pp.15-26, 2002.
DOI : 10.1006/biol.2001.0290

E. Caul and H. Appleton, The electron microscopical and physical characteristics of small round human fecal viruses: An interim scheme for classification, Journal of Medical Virology, vol.129, issue.4, pp.257-265, 1982.
DOI : 10.1002/jmv.1890090403

K. Chan, J. Lin, S. Lee, C. Liao, M. Tsai et al., Identification and phylogenetic analysis of orf virus from goats in Taiwan, Virus Genes, vol.93, issue.3, pp.705-712, 2007.
DOI : 10.1007/s11262-007-0144-6

K. Chua, K. Goh, K. Wong, A. Kamarulzaman, P. Tan et al., Fatal encephalitis due to Nipah virus among pig-farmers in Malaysia, The Lancet, vol.354, issue.9186, pp.1257-1259, 1999.
DOI : 10.1016/S0140-6736(99)04299-3

Y. Cossart, A. Field, B. Cant, and D. Widdows, PARVOVIRUS-LIKE PARTICLES IN HUMAN SERA, The Lancet, vol.305, issue.7898, pp.72-73, 1975.
DOI : 10.1016/S0140-6736(75)91074-0

K. Coyne, B. Jones, A. Kipar, J. Chantrey, C. Porter et al., Lethal outbreak of disease associated with feline calicivirus infection in cats, Veterinary Record, vol.158, issue.16, pp.544-550, 2006.
DOI : 10.1136/vr.158.16.544

A. Curry, H. Appleton, and B. Dowsett, Application of transmission electron microscopy to the clinical study of viral and bacterial infections: Present and future, Micron, vol.37, issue.2, pp.91-106, 2006.
DOI : 10.1016/j.micron.2005.10.001

A. Curry, A. Bryden, P. Morgan-capner, E. Caul, A. Curry et al., Rationalised virological electron microscope specimen testing policy A rationalised virological electron microscope specimen testing policy: PHLS north west viral gastroenteritis and electron miscroscopy subcommittee, J Clin Pathol. J Clin Pathol, vol.53, issue.52, pp.163-471, 1999.

A. Curry, E. Caul, and P. Morgan-capner, Rationalised virological electron microscope specimen testing policy, J Clin Pathol, vol.53, pp.722-723, 2000.

M. Cyrklaff, C. Risco, J. Fernandez, M. Jimenez, M. Esteban et al., Cryo-electron tomography of vaccinia virus, Proceedings of the National Academy of Sciences, vol.102, issue.8, pp.2772-2777, 2005.
DOI : 10.1073/pnas.0409825102

D. Dane, C. Cameron, and M. Briggs, VIRUS-LIKE PARTICLES IN SERUM OF PATIENTS WITH AUSTRALIA-ANTIGEN-ASSOCIATED HEPATITIS, The Lancet, vol.295, issue.7649, pp.695-698, 1970.
DOI : 10.1016/S0140-6736(70)90926-8

R. Donahue, S. Kessler, D. Bodine, K. Mcdonagh, C. Dunbar et al., Helper virus induced T cell lymphoma in nonhuman primates after retroviral mediated gene transfer, Journal of Experimental Medicine, vol.176, issue.4, pp.1125-1135, 1992.
DOI : 10.1084/jem.176.4.1125

S. Feinstone, A. Kapikian, and R. Purcell, Hepatitis A, European Journal of Gastroenterology & Hepatology, vol.8, issue.4, pp.1026-1028, 1973.
DOI : 10.1097/00042737-199604000-00002
URL : https://hal.archives-ouvertes.fr/hal-00313678

T. Flewett, A. Bryden, and H. Davies, VIRUS PARTICLES IN GASTROENTERITIS, The Lancet, vol.302, issue.7844, 1973.
DOI : 10.1016/S0140-6736(73)92760-8

F. Forster, O. Medella, N. Zauberman, W. Baumeister, and D. Fass, Retrovirus envelope protein complex structure in situ studied by cryo-electron tomography, Proceedings of the National Academy of Sciences, vol.102, issue.13, pp.4729-4734, 2005.
DOI : 10.1073/pnas.0409178102

F. Frischknecht, O. Renaud, and S. Shorte, Imaging today's infectious animalcules, Current Opinion in Microbiology, vol.9, issue.3, pp.297-306, 2006.
DOI : 10.1016/j.mib.2006.04.007

G. Gaietta, T. Deerinck, S. Adams, J. Bouwer, O. Tour et al., Multicolor and Electron Microscopic Imaging of Connexin Trafficking, Science, vol.296, issue.5567, pp.503-507, 2002.
DOI : 10.1126/science.1068793

S. Gardner, A. Field, D. Coleman, and B. Hulme, NEW HUMAN PAPOVAVIRUS (B.K.) ISOLATED FROM URINE AFTER RENAL TRANSPLANTATION, The Lancet, vol.297, issue.7712, pp.1253-1257, 1971.
DOI : 10.1016/S0140-6736(71)91776-4

C. Goldsmith, K. Tatti, T. Ksiazek, P. Rollin, J. Comer et al., Ultrastructural Characterization of SARS Coronavirus, Emerging Infectious Diseases, vol.10, issue.2, pp.320-326, 2004.
DOI : 10.3201/eid1002.030913

B. Giepmans, T. Deerinck, B. Smarr, and Y. Jones, Correlated light and electron microscopic imaging of multiple endogenous proteins using Quantum dots, Nature Methods, vol.314, issue.10, pp.743-749, 2005.
DOI : 10.1038/nbt914

G. Griffiths and P. Rottier, Cell biology of viruses that assemble along the biosynthetic pathway, Seminars in Cell Biology, vol.3, issue.5, pp.367-381, 1982.
DOI : 10.1016/1043-4682(92)90022-N

B. Grigorov, F. Arcanger, P. Roingeard, J. Darlix, and D. Muriaux, Assembly of Infectious HIV-1 in Human Epithelial and T-Lymphoblastic Cell Lines, Journal of Molecular Biology, vol.359, issue.4, pp.848-862, 2006.
DOI : 10.1016/j.jmb.2006.04.017

K. Grunewald, P. Desai, D. Winckler, J. Heymann, D. Belnap et al., Three-Dimensional Structure of Herpes Simplex Virus from Cryo-Electron Tomography, Science, vol.302, issue.5649, pp.1396-1398, 2003.
DOI : 10.1126/science.1090284

M. Guo, J. Evermann, and L. Saif, Detection and molecular characterization of cultivable caliciviruses from clinically normal mink and enteric caliciviruses associated with diarrhea in mink, Archives of Virology, vol.146, issue.3, pp.479-493, 2001.
DOI : 10.1007/s007050170157

F. Haguenau, P. Hawkes, J. Hutchison, B. Satiat-jeunemaitre, G. Simon et al., Key Events in the History of Electron Microscopy, Microscopy and Microanalysis, vol.9, issue.02, pp.96-138, 2003.
DOI : 10.1017/S1431927603030113

A. Harris, G. Cardone, D. Winckler, J. Heyman, M. Brecher et al., Influenza virus pleiomorphy characterized by cryoelectron tomography, Proceedings of the National Academy of Sciences, vol.103, issue.50, pp.19123-19127, 2006.
DOI : 10.1073/pnas.0607614103

A. Helenius, J. Kartenbeck, K. Simons, and E. Fries, On the entry of semliki forest virus into BHK-21 cells, The Journal of Cell Biology, vol.84, issue.2, pp.404-424, 1980.
DOI : 10.1083/jcb.84.2.404

D. Henderson, Countering the Posteradication Threat of Smallpox and Polio, Clinical Infectious Diseases, vol.34, issue.1, pp.79-83, 2002.
DOI : 10.1086/323897

C. Hourioux, M. Ait-goughoulte, R. Patient, D. Fouquenet, F. Arcanger-doudet et al., Core protein domains involved in hepatitis C virus-like particle assembly and budding at the endoplasmic reticulum membrane, Cellular Microbiology, vol.72, issue.6, pp.1014-1027, 2007.
DOI : 10.1073/pnas.0503596102
URL : https://hal.archives-ouvertes.fr/inserm-00137282

C. Hourioux, D. Brand, P. Sizaret, F. Lemiale, S. Lebigot et al., Particles, AIDS Research and Human Retroviruses, vol.16, issue.12, pp.1141-1147, 2000.
DOI : 10.1089/088922200414983
URL : https://hal.archives-ouvertes.fr/inserm-00422971

A. Huovila, A. Eder, and S. Fuller, Hepatitis B surface antigen assembles in a post-ER, pre-Golgi compartment, The Journal of Cell Biology, vol.118, issue.6, pp.1305-1320, 1992.
DOI : 10.1083/jcb.118.6.1305

M. Jones, B. Harrach, R. Ganac, M. Gozum, W. De-la-cruz et al., New Adenovirus Species Found in a Patient Presenting with Gastroenteritis, Journal of Virology, vol.81, issue.11, pp.5978-5984, 2007.
DOI : 10.1128/JVI.02650-06

M. Jones, V. Lukashov, R. Ganac, and D. Schnurr, Discovery of a Novel Human Picornavirus in a Stool Sample from a Pediatric Patient Presenting with Fever of Unknown Origin, Journal of Clinical Microbiology, vol.45, issue.7, pp.2144-2150, 2007.
DOI : 10.1128/JCM.00174-07

N. Jouvenet, S. Neil, C. Bess, M. Johnson, C. Virgen et al., Plasma Membrane Is the Site of Productive HIV-1 Particle Assembly, PLoS Biology, vol.149, issue.12, p.435, 2006.
DOI : 10.1371/journal.pbio.0040435.sv003

A. Kapikian, The Discovery of the 27???nm Norwalk Virus: An Historic Perspective, The Journal of Infectious Diseases, vol.181, issue.s2, pp.295-302, 2000.
DOI : 10.1086/315584

A. Kapikian, R. Wyatt, R. Dolin, T. Thornhill, A. Kalica et al., Visualization by immune electron microscopy of a 27-nm particle associated with acute infectious nonbacterial gastroenteritis, J Virol, vol.10, pp.1075-1081, 1972.

J. Kartenbeck, H. Stukenbrok, and A. Helenius, Endocytosis of simian virus 40 into the endoplasmic reticulum, The Journal of Cell Biology, vol.109, issue.6, pp.2721-2729, 1989.
DOI : 10.1083/jcb.109.6.2721

M. Knoll and E. Ruska, Das elektronenmikroscop. Zeitschrift fur Physik, pp.318-329, 1932.

T. Ksiazek, D. Erdman, C. Goldsmith, S. Zaki, T. Peret et al., A Novel Coronavirus Associated with Severe Acute Respiratory Syndrome, New England Journal of Medicine, vol.348, issue.20, pp.1953-1966, 2003.
DOI : 10.1056/NEJMoa030781

J. Lanman, J. Crum, T. Deerinck, G. Gaietta, A. Schneemann et al., Visualizing flock house virus infection in drosophilia cells with correlated fluoresence and electron microscopy, Struct Biol, 2007.

I. Literak, B. Smid, L. Dubska, L. Bryndza, and L. Valicek, An Outbreak of the Polyomavirus Infection in Budgerigars and Cockatiels in Slovakia, Including a Genome Analysis of an Avian Polyomavirus Isolate, Avian Diseases, vol.50, issue.1, pp.120-123, 2006.
DOI : 10.1637/7395-061605R.1

C. Madeley and B. Cosgrove, 28 nm PARTICLES IN F??CES IN INFANTILE GASTROENTERITIS, The Lancet, vol.306, issue.7932, pp.451-452, 1975.
DOI : 10.1016/S0140-6736(75)90858-2

C. Madeley and B. Cosgrove, CALICIVIRUSES IN MAN, The Lancet, vol.307, issue.7952, pp.199-200, 1976.
DOI : 10.1016/S0140-6736(76)91309-X

Y. Maeda, T. Shibahara, Y. Wada, K. Kadota, T. Kanno et al., An outbreak of teat papillomatosis in cattle caused by bovine papilloma virus (BPV) type 6 and unclassified BPVs, Veterinary Microbiology, vol.121, issue.3-4, pp.242-248, 2007.
DOI : 10.1016/j.vetmic.2006.12.015

M. Marsh and A. Helenius, Virus Entry: Open Sesame, Cell, vol.124, issue.4, pp.729-769, 2006.
DOI : 10.1016/j.cell.2006.02.007

K. Matz-rensing, H. Ellerbrok, B. Ehlers, G. Pauli, A. Floto et al., Fatal Poxvirus Outbreak in a Colony of New World Monkeys, Veterinary Pathology, vol.43, issue.2, pp.212-218, 2006.
DOI : 10.1354/vp.43-2-212

M. Mayo, A summary of taxonomic changes recently approved by ICTV, Archives of Virology, vol.147, issue.8, pp.1655-1663, 2002.
DOI : 10.1007/s007050200039

C. Mcgaughey, . Neill-'h, D. Wyatt, and P. Coyle, Rationalised virological electron microscope specimen testing policy, Journal of Clinical Pathology, vol.53, issue.2, 2000.
DOI : 10.1136/jcp.53.2.163

C. Mcgaughey, . Neill-'h, D. Wyatt, and P. Coyle, Rationalised virological electron microscope specimen testing policy, Journal of Clinical Pathology, vol.53, issue.2, 2000.
DOI : 10.1136/jcp.53.2.163

J. Mclauchlan, M. Lemberg, G. Hope, and B. Martoglio, Intramembrane proteolysis promotes trafficking of hepatitis C virus core protein to lipid droplets, The EMBO Journal, vol.21, issue.15, pp.3980-3988, 2002.
DOI : 10.1093/emboj/cdf414

M. Medici, M. Martinelli, F. Ruggeri, L. Abelli, S. Bosco et al., Broadly Reactive Nested Reverse Transcription-PCR Using an Internal RNA Standard Control for Detection of Noroviruses in Stool Samples, Journal of Clinical Microbiology, vol.43, issue.8, pp.3772-3778, 2005.
DOI : 10.1128/JCM.43.8.3772-3778.2005

S. Miller, Bioterrorism and Electron Microscopic Differentiation of Poxviruses from Herpesviruses: Dos and Don'ts, Ultrastructural Pathology, vol.27, issue.3, pp.133-140, 2003.
DOI : 10.1080/01913120309932

C. Morris, T. Flewett, A. Bryden, and H. Davies, Epidemic viral enteritis in a long-stay children s ward ' . Lancet, pp.4-5, 1975.

K. Murray, P. Selleck, P. Hooper, A. Hyatt, A. Gould et al., A morbillivirus that caused fatal disease in horses and humans, Science, vol.268, issue.5207, pp.94-97, 1995.
DOI : 10.1126/science.7701348

F. Nagler and G. Rake, The use of the electron microscope in diagnosis of variola, vaccinia, and varicella, J Bacteriol, vol.55, pp.45-51, 1948.

R. Novoa, G. Calderita, R. Arranz, J. Fontana, H. Granzow et al., Virus factories: associations of cell organelles for viral replication and morphogenesis, Biology of the Cell, vol.73, issue.Suppl., pp.147-172, 2005.
DOI : 10.1042/BC20040058

T. Oka, K. Katayama, G. Hansman, T. Kageyama, S. Ogawa et al., Detection of human sapovirus by real-time reverse transcription-polymerase chain reaction, Journal of Medical Virology, vol.114, issue.10, pp.1347-1353, 2006.
DOI : 10.1002/jmv.20699

R. Patient, C. Hourioux, P. Sizaret, S. Trassard, C. Sureau et al., Hepatitis B Virus Subviral Envelope Particle Morphogenesis and Intracellular Trafficking, Journal of Virology, vol.81, issue.8, pp.3842-3851, 2007.
DOI : 10.1128/JVI.02741-06

A. Pelchen-matthews and M. Marsh, Electron Microscopy Analysis of Viral Morphogenesis, Methods Cell Biol, vol.79, pp.515-542, 2007.
DOI : 10.1016/S0091-679X(06)79020-3

E. Prukner-radovcic, D. Luschow, I. Ciglar-grozdanic, M. Tisljar, H. Mazija et al., Isolation and Molecular Biological Investigations of Avian Poxviruses from Chickens, a Turkey, and a Pigeon in Croatia, Avian Diseases, vol.50, issue.3, pp.440-444, 2006.
DOI : 10.1637/7506-012006R.1

K. Reed, J. Melski, M. Graham, R. Regnery, M. Sotir et al., The Detection of Monkeypox in Humans in the Western Hemisphere, New England Journal of Medicine, vol.350, issue.4, pp.342-350, 2004.
DOI : 10.1056/NEJMoa032299

L. Rodak, L. Valicek, B. Smid, and Z. Nevorankova, An ELISA optimized for porcine epidemic diarrhoea virus detection in faeces, Veterinary Microbiology, vol.105, issue.1, pp.9-17, 2005.
DOI : 10.1016/j.vetmic.2004.09.020

P. Roingeard, C. Hourioux, E. Blanchard, D. Brand, and M. Ait-goughoulte, Hepatitis C virus ultrastructure and morphogenesis, Biology of the Cell, vol.96, issue.2, pp.103-108, 2004.
DOI : 10.1016/j.biolcel.2003.11.006

K. Roux and K. Taylor, AIDS virus envelope spike structure, Current Opinion in Structural Biology, vol.17, issue.2, pp.244-252, 2007.
DOI : 10.1016/j.sbi.2007.03.008

E. Ruska, The Development of the Electron Microscope and of Electron Microscopy(Nobel Lecture), Angewandte Chemie International Edition in English, vol.26, issue.7, pp.607-629, 1987.
DOI : 10.1002/anie.198705953

H. Ruska, B. Von-borries, and E. Ruska, Die Bedeutung der ???bermikroskopie f???r die Virusforschung, Archiv f???r die gesamte Virusforschung, vol.26, issue.1, pp.155-159, 1939.
DOI : 10.1007/BF01243399

Y. Tang, Q. Wang, and M. Saif, Development of a ssRNA internal control template reagent for a multiplex RT-PCR to detect turkey astroviruses, Journal of Virological Methods, vol.126, issue.1-2, pp.81-86, 2005.
DOI : 10.1016/j.jviromet.2004.12.006

D. Tyrrell and J. Almeida, Direct electron-microscopy of organ cultures for the detection and characterization of viruses, Archiv f???r die gesamte Virusforschung, vol.23, issue.Supp., pp.417-425, 1967.
DOI : 10.1007/BF01242962

W. Van-der-poel, R. Van-der-heide, F. Verschoor, H. Gelderblom, J. Vinje et al., Epidemiology of Norwalk-like virus infections in cattle in The Netherlands, Veterinary Microbiology, vol.92, issue.4, pp.297-309, 2003.
DOI : 10.1016/S0378-1135(02)00421-2

R. Weiss, Retroviruses produced by hybridomas, New Engl J Med, vol.307, 1982.

S. Welsch, O. Kepper, A. Haberman, I. Allespach, J. Krijnse-locker et al., HIV-1 buds predominantly at the plasma membrane of primary human macrophages, 2007.