Les mathématiques de l'hérédité, 1948. ,
Coefficients of Inbreeding and Relationship, The American Naturalist, vol.56, issue.645, pp.330-338, 1922. ,
DOI : 10.1086/279872
PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses, The American Journal of Human Genetics, vol.81, issue.3, pp.559-575, 2007. ,
DOI : 10.1086/519795
GCTA: A Tool for Genome-wide Complex Trait Analysis, The American Journal of Human Genetics, vol.88, issue.1, pp.76-82, 2011. ,
DOI : 10.1016/j.ajhg.2010.11.011
Homozygosity and linkage disequilibrium, Genetics, vol.160, pp.1707-1719, 2002. ,
Runs of Homozygosity in European Populations, The American Journal of Human Genetics, vol.83, issue.3, pp.359-372, 2008. ,
DOI : 10.1016/j.ajhg.2008.08.007
Genomic and geographic distribution of SNP-defined runs of homozygosity in Europeans, Human Molecular Genetics, vol.19, issue.15, pp.2927-2935, 2010. ,
DOI : 10.1093/hmg/ddq198
Measures of Autozygosity in Decline: Globalization, Urbanization, and Its Implications for Medical Genetics, PLoS Genetics, vol.15, issue.3, pp.1000415-1000425, 2009. ,
DOI : 10.1371/journal.pgen.1000415.s003
Extended tracts of homozygosity identify novel candidate genes associated with late-onset Alzheimer???s disease, neurogenetics, vol.55, issue.Spec No 1, pp.183-190, 2009. ,
DOI : 10.1007/s10048-009-0182-4
Extended tracts of homozygosity in outbred human populations, Human Molecular Genetics, vol.15, issue.5, pp.789-795, 2006. ,
DOI : 10.1093/hmg/ddi493
Global distribution of genomic diversity underscores rich complex history of continental human populations, Genome Research, vol.19, issue.5, pp.795-803, 2009. ,
DOI : 10.1101/gr.088898.108
Detecting autozygosity through runs of homozygosity: A comparison of three autozygosity detection algorithms, BMC Genomics, vol.22, issue.1, pp.460-474, 2011. ,
DOI : 10.1186/1471-2164-12-460
Runs of homozygosity reveal highly penetrant recessive loci in schizophrenia, Proceedings of the National Academy of Sciences, vol.104, issue.50, pp.19942-19947, 2007. ,
DOI : 10.1073/pnas.0710021104
Estimation of the inbreeding coefficient through use of genomic data, Am J Hum Genet, vol.73, pp.516-523, 2003. ,
Comparative assessment of methods for estimating individual genome-wide homozygosity-by-descent from human genomic data, BMC Genomics, vol.11, issue.1, pp.139-156, 2010. ,
DOI : 10.1186/1471-2164-11-139
URL : https://hal.archives-ouvertes.fr/inserm-00663772
Consanguinity around the world: what do the genomic data of the HGDP-CEPH diversity panel tell us?, European Journal of Human Genetics, vol.26, issue.5, pp.583-587, 2011. ,
DOI : 10.1159/000067666
Identity by descent estimation with dense genome-wide genotype data, Genetic Epidemiology, vol.122, pp.557-567, 2011. ,
DOI : 10.1002/gepi.20606
The Fine-Scale Structure of Recombination Rate Variation in the Human Genome, Science, vol.304, issue.5670, pp.581-584, 2004. ,
DOI : 10.1126/science.1092500
Comparison of Fine-Scale Recombination Rates in Humans and Chimpanzees, Science, vol.308, issue.5718, pp.107-111, 2005. ,
DOI : 10.1126/science.1105322
Linkage Disequilibrium and Haplotype Homozygosity in Population Samples Genotyped at a High Marker Density, Human Heredity, vol.62, issue.4, pp.175-189, 2006. ,
DOI : 10.1159/000096599
Relatedness mapping and tracts of relatedness for genome-wide data in the presence of linkage disequilibrium, Genetic Epidemiology, vol.62, issue.5, pp.266-274, 2009. ,
DOI : 10.1002/gepi.20378
Using identity by descent estimation with dense genotype data to detect positive selection, European Journal of Human Genetics, vol.3, issue.2, pp.205-211, 2013. ,
DOI : 10.1016/j.ajhg.2008.06.005
Multilocus Association Mapping Using Variable-Length Markov Chains, The American Journal of Human Genetics, vol.78, issue.6 ,
DOI : 10.1086/503876
Estimation of Pairwise Identity by Descent From Dense Genetic Marker Data in a Population Sample of Haplotypes, Genetics, vol.178, issue.4, pp.2123-2132, 2008. ,
DOI : 10.1534/genetics.107.084624
High-Resolution Detection of Identity by Descent in Unrelated Individuals, The American Journal of Human Genetics, vol.86, issue.4, pp.526-539, 2010. ,
DOI : 10.1016/j.ajhg.2010.02.021
Quantification of Inbreeding Due to Distant Ancestors and Its Detection Using Dense Single Nucleotide Polymorphism Data, Genetics, vol.189, issue.1, pp.237-249, 2011. ,
DOI : 10.1534/genetics.111.130922
Integrating common and rare genetic variation in diverse human populations, JE: Integrating common and rare genetic variation in diverse human populations, pp.52-58, 2010. ,
DOI : 10.1038/nature09298
Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the hnf4a region, Nat Genet, vol.41, pp.1330-1334, 2009. ,
Improved whole-chromosome phasing for disease and population genetic studies, Nature Methods, vol.78, issue.1, pp.5-6, 2013. ,
DOI : 10.1038/nmeth.2307
Common SNPs explain a large proportion of the heritability for human height, Nature Genetics, vol.31, issue.7, pp.565-569, 2010. ,
DOI : 10.1038/ng.608
Genomic Runs of Homozygosity Record Population History and Consanguinity, PLoS ONE, vol.81, issue.2, pp.13996-14030, 2010. ,
DOI : 10.1371/journal.pone.0013996.s001
Whole population, genome-wide mapping of hidden relatedness, Genome Research, vol.19, issue.2, pp.318-326, 2009. ,
DOI : 10.1101/gr.081398.108
Maximum-likelihood estimation of recent shared ancestry (ERSA), Genome Research, vol.21, issue.5, pp.768-774, 2011. ,
DOI : 10.1101/gr.115972.110
Inference of Unexpected Genetic Relatedness among Individuals in HapMap Phase III, The American Journal of Human Genetics, vol.87, issue.4, pp.457-464, 2010. ,
DOI : 10.1016/j.ajhg.2010.08.014
A second-generation combined linkage physical map of the human genome, Genome Research, vol.17, issue.12, pp.1783-1786, 2007. ,
DOI : 10.1101/gr.7156307
Sampling variances of heterozygosity and genetic distance, Genetics, vol.76, pp.379-390, 1974. ,
An Unbiased Estimator of Gene Diversity in Samples Containing Related Individuals, Molecular Biology and Evolution, vol.26, issue.3, pp.501-512, 2009. ,
DOI : 10.1093/molbev/msn254
Genomic Patterns of Homozygosity in Worldwide Human Populations, The American Journal of Human Genetics, vol.91, issue.2, pp.275-292, 2012. ,
DOI : 10.1016/j.ajhg.2012.06.014
Inferring Coancestry in Population Samples in the Presence of Linkage Disequilibrium, Genetics, vol.190, issue.4, pp.1447-1460, 2012. ,
DOI : 10.1534/genetics.111.137570
Using Genomic Inbreeding Coefficient Estimates for Homozygosity Mapping of Rare Recessive Traits: Application to Taybi-Linder Syndrome, The American Journal of Human Genetics, vol.79, issue.1, pp.62-66, 2006. ,
DOI : 10.1086/504640
Homozygosity mapping: a way to map human recessive traits with the DNA of inbred children, Science, vol.236, issue.4808, pp.1567-1570, 1987. ,
DOI : 10.1126/science.2884728
Could Inbred Cases Identified in GWAS Data Succeed in Detecting Rare Recessive Variants Where Affected Sib-Pairs Have Failed?, Human Heredity, vol.74, issue.3-4, pp.142-152, 2012. ,
DOI : 10.1159/000346790
Improved whole-chromosome phasing for disease and population genetic studies, Nature Methods, vol.78, issue.1, pp.5-6, 2013. ,
DOI : 10.1038/nmeth.2307
Linkage Disequilibrium and Haplotype Homozygosity in Population Samples Genotyped at a High Marker Density, Human Heredity, vol.62, issue.4, pp.175-189, 2006. ,
DOI : 10.1159/000096599
Identity by descent estimation with dense genome-wide genotype data, Genetic Epidemiology, vol.122, pp.557-567, 2011. ,
DOI : 10.1002/gepi.20606
Relatedness mapping and tracts of relatedness for genome-wide data in the presence of linkage disequilibrium, Genetic Epidemiology, vol.62, issue.5, pp.266-274, 2009. ,
DOI : 10.1002/gepi.20378
Estimation of the inbreeding coefficient through use of genomic data, Am J Hum Genet, vol.73, issue.6, pp.516-523, 2003. ,
Estimation of linkage disequilibrium in randomly mating populations, Heredity, vol.33, issue.2, pp.229-239, 1974. ,
DOI : 10.1038/hdy.1974.89
The Fine-Scale Structure of Recombination Rate Variation in the Human Genome, Science, vol.304, issue.5670, pp.581-584, 2004. ,
DOI : 10.1126/science.1092500
Maximum-likelihood estimation of recent shared ancestry (ERSA), Genome Research, vol.21, issue.5, pp.768-774, 2011. ,
DOI : 10.1101/gr.115972.110