Neonatal alloimmune thrombocytopenia, Thrombocytopenia, pp.223-244, 2006. ,
DOI : 10.3324/haematol.13160
A Polymorphism of a Platelet Glycoprotein Receptor as an Inherited Risk Factor for Coronary Thrombosis, New England Journal of Medicine, vol.334, issue.17, pp.1090-1094, 1996. ,
DOI : 10.1056/NEJM199604253341703
The human platelet alloantigens, PlA1 and PlA2, are associated with a leucine33/proline33 amino acid polymorphism in membrane glycoprotein IIIa, and are distinguishable by DNA typing., Journal of Clinical Investigation, vol.83, issue.5, pp.1778-1781, 1989. ,
DOI : 10.1172/JCI114082
Involvement of the cystein-rich domain of glycoprotein IIIa in the expression of the human platelet alloantigen, Pl A1 : Evidence for heterogeneity in the humoral response, Blood, vol.85, pp.3028-3033, 1995. ,
Inhibition of binding of anti- PlA 1 antibodies to platelets with monoclonal antibody LK-4, evidence for multiple PlA 1 receptor sites on platelet GP IIIa, Blood, vol.88, pp.3601-3607, 1996. ,
Leucine33-proline33 substitution in human platelet glycoprotein IIIa determines HLA-DRw52a (DW24) association of the immune response against HPA-1a (Zwa/PIA1) and HPA-1b (Zwb/PIA2), Human Immunology, vol.34, issue.4, pp.253-256, 1992. ,
DOI : 10.1016/0198-8859(92)90024-H
A meta-analysis of studies on the association of the platelet PlA polymorphism of glycoprotein IIIa and risk of coronary heart disease, Statistics in Medicine, vol.348, issue.10, pp.1741-1760, 2003. ,
DOI : 10.1002/sim.1375
Platelet glycoprotein receptor IIIa polymorphism PLA1/PLA2 and coronary risk: a meta-analysis, Thromb Haemost, vol.85, pp.626-633, 2001. ,
Molecular mechanisms of prothrombotic risk due to genetic variations in platelet genes: Enhanced outside-in signaling through the Pro33 variant of integrin beta3, Exp Biol Med (Maywood ), vol.231, pp.505-513, 2006. ,
The Protein Data Bank, Nucleic Acids Research, vol.28, issue.1, pp.235-242, 2000. ,
DOI : 10.1093/nar/28.1.235
Structure of a Complete Integrin Ectodomain in a Physiologic Resting State and Activation and Deactivation by Applied Forces, Molecular Cell, vol.32, issue.6, pp.849-861, 2008. ,
DOI : 10.1016/j.molcel.2008.11.018
Bayesian probabilistic approach for predicting backbone structures in terms of protein blocks, Proteins: Structure, Function, and Genetics, vol.7, issue.3, pp.271-287, 2000. ,
DOI : 10.1002/1097-0134(20001115)41:3<271::AID-PROT10>3.0.CO;2-Z
URL : https://hal.archives-ouvertes.fr/inserm-00132821
Comparative Protein Modelling by Satisfaction of Spatial Restraints, Journal of Molecular Biology, vol.234, issue.3, pp.779-815, 1993. ,
DOI : 10.1006/jmbi.1993.1626
Crystal structure of the complete integrin ??V??3 ectodomain plus an ??/?? transmembrane fragment, The Journal of Cell Biology, vol.108, issue.4, pp.589-600, 2009. ,
DOI : 10.1016/j.molcel.2009.02.022
The PyMOL Molecular Graphics System, 2002. ,
GROMACS 4:?? Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation, Journal of Chemical Theory and Computation, vol.4, issue.3, pp.435-447, 2008. ,
DOI : 10.1021/ct700301q
Development and Testing of the OPLS All-Atom Force Field on Conformational Energetics and Properties of Organic Liquids, Journal of the American Chemical Society, vol.118, issue.45, pp.11225-11236, 1996. ,
DOI : 10.1021/ja9621760
Molecular dynamics with coupling to an external bath, The Journal of Chemical Physics, vol.81, issue.8, pp.3684-3691, 1984. ,
DOI : 10.1063/1.448118
Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models, Journal of Computational Chemistry, vol.114, issue.8, pp.952-962, 1992. ,
DOI : 10.1002/jcc.540130805
LINCS: A linear constraint solver for molecular simulations, Journal of Computational Chemistry, vol.19, issue.12, pp.1463-1472, 1997. ,
DOI : 10.1002/(SICI)1096-987X(199709)18:12<1463::AID-JCC4>3.0.CO;2-H
) method for Ewald sums in large systems, The Journal of Chemical Physics, vol.98, issue.12, pp.10089-10092, 1993. ,
DOI : 10.1063/1.464397
A smooth particle mesh Ewald method, The Journal of Chemical Physics, vol.103, issue.19, pp.8577-8593, 1995. ,
DOI : 10.1063/1.470117
Protein contacts, inter-residue interactions and side-chain modelling, Biochimie, vol.90, issue.4, pp.626-639, 2008. ,
DOI : 10.1016/j.biochi.2007.11.007
URL : https://hal.archives-ouvertes.fr/inserm-00189828
ASAView: database and tool for solvent accessibility representation in proteins, BMC Bioinformatics, vol.5, issue.1, p.51, 2004. ,
DOI : 10.1186/1471-2105-5-51
Essential dynamics of proteins, Proteins: Structure, Function, and Genetics, vol.158, issue.4, pp.412-425, 1993. ,
DOI : 10.1002/prot.340170408
A short survey on protein blocks, Biophysical Reviews, vol.30, issue.3, pp.137-147, 2010. ,
DOI : 10.1007/s12551-010-0036-1
URL : https://hal.archives-ouvertes.fr/inserm-00512823
Progressive structure-based alignment of homologous proteins: Adopting sequence comparison strategies, Biochimie, vol.94, issue.9, 2012. ,
DOI : 10.1016/j.biochi.2012.05.028
URL : https://hal.archives-ouvertes.fr/inserm-00750325
A structural model of a seven-transmembrane helix receptor: The Duffy antigen/receptor for chemokine (DARC), Biochimica et Biophysica Acta (BBA) - General Subjects, vol.1724, issue.3, pp.288-306, 2005. ,
DOI : 10.1016/j.bbagen.2005.05.016
URL : https://hal.archives-ouvertes.fr/inserm-00143373
Protein short loop prediction in terms of a structural alphabet, Computational Biology and Chemistry, vol.33, issue.4, pp.329-333, 2009. ,
DOI : 10.1016/j.compbiolchem.2009.06.002
URL : https://hal.archives-ouvertes.fr/inserm-00396485
New assessment of a structural alphabet, In Silico Biol, vol.5, pp.283-289, 2005. ,
URL : https://hal.archives-ouvertes.fr/inserm-00132875
Structural basis for allostery in integrins and binding to fibrinogen-mimetic therapeutics, Nature, vol.83, issue.7013, pp.59-67, 2004. ,
DOI : 10.1074/jbc.271.36.21978
mRNA splicing, expression, and structure-function, Human Mutation, vol.32, issue.3, pp.237-246, 2010. ,
DOI : 10.1002/humu.21179
URL : https://hal.archives-ouvertes.fr/inserm-00448024
A simple method for displaying the hydropathic character of a protein, Journal of Molecular Biology, vol.157, issue.1, pp.105-132, 1982. ,
DOI : 10.1016/0022-2836(82)90515-0
Influence of proline residues on protein conformation, Journal of Molecular Biology, vol.218, issue.2, pp.397-412, 1991. ,
DOI : 10.1016/0022-2836(91)90721-H
Epitopes on protein antigens: Misconceptions and realities, Cell, vol.61, issue.4, pp.553-556, 1990. ,
DOI : 10.1016/0092-8674(90)90464-P
A generic approach to evaluate how B-cell epitopes are surface-exposed on protein structures, Molecular Immunology, vol.48, issue.4, pp.577-585, 2011. ,
DOI : 10.1016/j.molimm.2010.10.011
Computational characterization of B-cell epitopes, Molecular Immunology, vol.45, issue.12, pp.3477-3489, 2008. ,
DOI : 10.1016/j.molimm.2007.10.016
Prediction of discontinuous B-cell epitopes using logistic regression and structural information, Proteomics Bioinform, vol.4, pp.10-15, 2011. ,
HLA-DRw52a is involved in alloimmunization against PL-A1 antigen, Human Immunology, vol.27, issue.2, pp.73-79, 1990. ,
DOI : 10.1016/0198-8859(90)90104-W
An integrin polymorphism that defines reactivity with alloantibodies generates an anchor for MHC class II peptide binding: a model for unidirectional alloimmune responses, J Immunol, vol.158, pp.3221-3226, 1997. ,
Naturally processed peptides spanning the HPA-1a polymorphism are efficiently generated and displayed from platelet glycoprotein by HLA-DRB3*0101-positive antigen-presenting cells, Blood, vol.114, issue.9, pp.1954-1957, 2009. ,
DOI : 10.1182/blood-2009-04-211839
Construction of a human platelet alloantigen-1a epitope(s) within murine glycoprotein IIIa: identification of residues critical to the conformation of the antibody binding site(s), Blood, vol.93, pp.2959-2967, 1999. ,
integrin peptides designed for detection of HPA-1 antibodies, Journal of Thrombosis and Haemostasis, vol.40, issue.2, pp.366-375, 2008. ,
DOI : 10.1111/j.1538-7836.2008.02858.x
A naturally occurring Leu33Val mutation in beta3-integrin impairs the HPA-1a epitope: the third allele of HPA-1, Transfusion, vol.92, issue.5, pp.790-799, 2006. ,
DOI : 10.1046/j.1365-2141.2003.04408.x
The PlA2 allele and cardiovascular disease: the pro33 and con, Journal of Clinical Investigation, vol.105, issue.6, pp.697-698, 2000. ,
DOI : 10.1172/JCI9629
Effect of the PlA2 alloantigen on the function of beta3-integrins in platelets, Blood, vol.97, issue.10, pp.3093-3099, 2001. ,
DOI : 10.1182/blood.V97.10.3093
The PlA2 polymorphism of integrin ??3 enhances outside-in signaling and adhesive functions, Journal of Clinical Investigation, vol.105, issue.6, pp.793-802, 2000. ,
DOI : 10.1172/JCI6982
HPA-1 polymorphism of alphaIIbbeta3 modulates platelet adhesion onto immobilized fibrinogen in an in-vitro flow system, Thromb J, vol.5, p.1, 2007. ,
Platelet antigens and their function, Vox Sanguinis, vol.93, issue.s2, pp.105-111, 2004. ,
DOI : 10.1016/S0049-3848(00)00180-8
Selective recognition of adhesive sites in surfacebound fibrinogen by glycoprotein IIb-IIIa on non-activated platelets, J Biol Chem, vol.266, pp.11227-11233, 1991. ,
Regulation of integrin affinity on cell surfaces, The EMBO Journal, vol.32, issue.23, pp.4712-4727, 2011. ,
DOI : 10.1038/emboj.2011.333