Sex and adaptation In The Evolution of Sex: An Examination of Current Ideas, pp.253-269 ,
Fitness of RNA virus decreased by Muller's ratchet, Nature, vol.348, issue.6300, pp.454-455, 1990. ,
DOI : 10.1038/348454a0
Muller's Ratchet and the Advantage of Sex in the RNA Virus ??6, Evolution, vol.46, issue.2, pp.289-299, 1992. ,
DOI : 10.2307/2409851
Evolutionary aspects of recombination in RNA viruses, Journal of General Virology, vol.80, issue.10, pp.2535-2543, 1999. ,
DOI : 10.1099/0022-1317-80-10-2535
Evolution of sex in RNA viruses, Trends in Ecology & Evolution, vol.7, issue.5, pp.147-151, 1992. ,
DOI : 10.1016/0169-5347(92)90207-R
Why do RNA viruses recombine?, Nature Reviews Microbiology, vol.23, issue.8, pp.617-626, 2011. ,
DOI : 10.1038/nrmicro2614
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3324781
Genetic exchange by recombination or reassortment is infrequent in natural populations of a tripartite RNA plant virus, J Virol, vol.71, pp.934-940, 1997. ,
Multiple Reassortment Events in the Evolutionary History of H1N1 Influenza A Virus Since 1918, PLoS Pathogens, vol.14, issue.2, p.1000012, 1918. ,
DOI : 10.1371/journal.ppat.1000012.s001
Reassortment between Two Serologically Unrelated Bluetongue Virus Strains Is Flexible and Can Involve any Genome Segment, Journal of Virology, vol.87, issue.1, pp.543-557, 2012. ,
DOI : 10.1128/JVI.02266-12
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3536370
Widespread genetic exchange among terrestrial bacteriophages, Proceedings of the National Academy of Sciences, vol.102, issue.52, pp.19009-19014, 2005. ,
DOI : 10.1073/pnas.0503074102
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1323146
Constraints to Genetic Exchange Support Gene Coadaptation in a Tripartite RNA Virus, PLoS Pathogens, vol.29, issue.1, pp.67-74, 2007. ,
DOI : 10.1371/journal.ppat.0030008.st004
Influenza: lessons from past pandemics, warnings from current incidents, Nature Reviews Microbiology, vol.4, issue.8, pp.591-600, 2005. ,
DOI : 10.1086/314713
Genetic characterization of hantaviruses isolated from Guizhou, China: Evidence for spillover and reassortment in nature, Journal of Medical Virology, vol.28, issue.6, pp.1033-1041, 2008. ,
DOI : 10.1002/jmv.21149
Geographic differences in sexual reassortment in Rna phage, Evolution, vol.64, pp.3010-3023, 2010. ,
Sex and the evolution of intrahost competition in RNA virus phi 6, Genetics, vol.150, pp.523-532, 1998. ,
Bacteriophage Phi-6 -lipid-containing virus of pseudomonas-phaseolicola, J Virol, vol.11, pp.799-805, 1973. ,
Isolation of additional bacteriophages with genomes of segmented double-stranded RNA, J Bacteriol, vol.181, pp.4505-4508, 1999. ,
The origin of phospholipids of the enveloped bacteriophage phi6, Virology, vol.326, issue.1, pp.182-190, 2004. ,
DOI : 10.1016/j.virol.2004.05.021
Molecular Markers, Natural History, and Evolution, 2004. ,
DOI : 10.1007/978-1-4615-2381-9
Agarose gel electrophoresis of bacteriophages and related particles, Journal of Chromatography B: Biomedical Sciences and Applications, vol.418, pp.345-357, 1987. ,
DOI : 10.1016/0378-4347(87)80014-2
The process of infection with bacteriophage ??X174 XII???. Phenotypic mixing between electrophoretic mutants of ??X174, Journal of Molecular Biology, vol.23, issue.3, pp.553-575, 1967. ,
DOI : 10.1016/S0022-2836(67)80125-6
Proteins of bacteriophage Phi6, J Virol, vol.16, pp.685-695, 1975. ,
Hybrid frequencies confirm limit to coinfection in the RNA bacteriophage phi 6, J Virol, vol.73, pp.2420-2424, 1999. ,
Prisoner's dilemma in an RNA virus, Nature, vol.398, issue.6726, pp.441-443, 1999. ,
DOI : 10.1038/18913
mixtools: an R package for analyzing finite mixture models, J Stat Softw, vol.32, pp.1-29, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-00384896
MCLUST version 3 for R: Normal mixture modeling and model-based clustering, 2006. ,
Net Positive Charge of HIV-1 CRF01_AE V3 Sequence Regulates Viral Sensitivity to Humoral Immunity, PLoS ONE, vol.185, issue.9, p.3206, 2008. ,
DOI : 10.1371/journal.pone.0003206.s009
The GraRS regulatory system controls Staphylococcus aureus susceptibility to antimicrobial host defenses, BMC Microbiology, vol.8, issue.1, p.85, 2008. ,
DOI : 10.1186/1471-2180-8-85
Cryo-Electron Tomographic Structure of an Immunodeficiency Virus Envelope Complex In Situ, PLoS Pathogens, vol.58, issue.8, p.83, 2006. ,
DOI : 10.1371/journal.ppat.0020083.sv001
Virus movement maintains local virus population diversity, Proceedings of the National Academy of Sciences, vol.104, issue.48, pp.19102-19107, 2007. ,
DOI : 10.1073/pnas.0709445104
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2141915
Biodiversity and biogeography of phages in modern stromatolites and thrombolites, Nature, vol.78, issue.7185, pp.340-343, 2008. ,
DOI : 10.1038/nature06735
High Diversity of the Viral Community from an Antarctic Lake, Science, vol.326, issue.5954, pp.858-861, 2009. ,
DOI : 10.1126/science.1179287
Defective interfering viruses and their potential as antiviral agents, Reviews in Medical Virology, vol.87, issue.1, pp.51-62, 2010. ,
DOI : 10.1002/rmv.641