Intrinsically unstructured proteins, Trends in Biochemical Sciences, vol.27, issue.10, pp.527-533, 2002. ,
DOI : 10.1016/S0968-0004(02)02169-2
Insights into the structure and dynamics of unfolded proteins from nuclear magnetic resonance. Unfolded Proteins, pp.311-340, 2002. ,
Coupling of folding and binding for unstructured proteins, Current Opinion in Structural Biology, vol.12, issue.1, pp.54-60, 2002. ,
DOI : 10.1016/S0959-440X(02)00289-0
Intrinsically unstructured proteins and their functions, Nature Reviews Molecular Cell Biology, vol.278, issue.3, pp.197-208, 2005. ,
DOI : 10.1038/nrm1589
Flexible nets. The roles of intrinsic disorder in protein interaction networks, FEBS Journal, vol.14, issue.20, pp.5129-5148, 2005. ,
DOI : 10.1093/nar/gkh086
Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling, Journal of Molecular Recognition, vol.285, issue.5, pp.343-384, 2005. ,
DOI : 10.1002/jmr.747
Intrinsic Disorder in the Protein Data Bank, Journal of Biomolecular Structure and Dynamics, vol.63, issue.1, pp.325-341, 2007. ,
DOI : 10.1080/07391102.2007.10507123
Intrinsic Disorder and Functional Proteomics, Biophysical Journal, vol.92, issue.5, pp.1439-1456, 2007. ,
DOI : 10.1529/biophysj.106.094045
DisProt: the Database of Disordered Proteins, Nucleic Acids Research, vol.35, issue.Database, pp.786-793, 2007. ,
DOI : 10.1093/nar/gkl893
Atomic-level characterization of disordered protein ensembles, Current Opinion in Structural Biology, vol.17, issue.1, pp.3-14, 2007. ,
DOI : 10.1016/j.sbi.2007.01.009
Concept, Annual Review of Biophysics, vol.37, issue.1, pp.215-246, 2008. ,
DOI : 10.1146/annurev.biophys.37.032807.125924
Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life, Journal of Molecular Biology, vol.337, issue.3, pp.635-645, 2004. ,
DOI : 10.1016/j.jmb.2004.02.002
Intrinsic Disorder in Cell-signaling and Cancer-associated Proteins, Journal of Molecular Biology, vol.323, issue.3, pp.573-584, 2002. ,
DOI : 10.1016/S0022-2836(02)00969-5
Neuropathology, biochemistry, and biophysics of alphasynuclein aggregation, Journal of Neurochemistry, vol.103, pp.17-37, 2007. ,
Mechanism of coupled folding and binding of an intrinsically disordered protein, Nature, vol.42, issue.7147, pp.1021-1011, 2007. ,
DOI : 10.1038/nature05858
A practical overview of protein disorder prediction methods, Proteins: Structure, Function, and Bioinformatics, vol.101, issue.Pt 3, pp.1-14, 2006. ,
DOI : 10.1002/prot.21075
Protein Disorder Prediction, Structure, vol.11, issue.11, pp.1453-1459, 2003. ,
DOI : 10.1016/j.str.2003.10.002
Why are ?natively unfolded? proteins unstructured under physiologic conditions?, Proteins: Structure, Function, and Genetics, vol.6, issue.3, pp.415-427, 2000. ,
DOI : 10.1002/1097-0134(20001115)41:3<415::AID-PROT130>3.0.CO;2-7
Flavors of protein disorder, Proteins: Structure, Function, and Bioinformatics, vol.6, issue.4, pp.573-584, 2003. ,
DOI : 10.1002/prot.10437
DisProt: a database of protein disorder, Bioinformatics, vol.21, issue.1, pp.137-140, 2005. ,
DOI : 10.1093/bioinformatics/bth476
Conformational distributions of unfolded polypeptides from novel NMR techniques, The Journal of Chemical Physics, vol.128, issue.5, 2008. ,
DOI : 10.1063/1.2838167
Determination of conformationally heterogeneous states of proteins, Current Opinion in Structural Biology, vol.17, issue.1, pp.15-20, 2007. ,
DOI : 10.1016/j.sbi.2007.01.002
: What Belongs to the Survival Kit?, Critical Reviews in Biochemistry and Molecular Biology, vol.5, issue.3, pp.221-238, 2008. ,
DOI : 10.1046/j.1365-2958.2001.02479.x
Deinococcus radiodurans ??? the consummate survivor, Nature Reviews Microbiology, vol.47, issue.11, pp.882-892, 2005. ,
DOI : 10.1007/s007920050121
DNA-membrane association and the repair of double breaks in X-irradiated Micrococcus radiodurans, Biochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis, vol.247, issue.1, p.38, 1971. ,
DOI : 10.1016/0005-2787(71)90805-7
Ringlike Structure of the Deinococcus radiodurans Genome: A Key to Radioresistance?, Science, vol.299, issue.5604, pp.254-256, 2003. ,
DOI : 10.1126/science.1077865
Accumulation of Mn(II) in Deinococcus radiodurans Facilitates Gamma-Radiation Resistance, Science, vol.306, issue.5698, pp.1025-1028, 2004. ,
DOI : 10.1126/science.1103185
Reassembly of shattered chromosomes in Deinococcus radiodurans, Nature, vol.268, pp.569-573, 2006. ,
DOI : 10.1038/nature05160
URL : https://hal.archives-ouvertes.fr/hal-00195137
The Nudix hydrolase superfamily, Cellular and Molecular Life Sciences, vol.63, issue.2, pp.123-143, 2006. ,
DOI : 10.1007/s00018-005-5386-7
Development of the multiple sequence approximation within the AGADIR model of ??-helix formation: Comparison with Zimm-Bragg and Lifson-Roig formalisms, Biopolymers, vol.34, issue.5, pp.495-509, 1997. ,
DOI : 10.1002/(SICI)1097-0282(19970415)41:5<495::AID-BIP2>3.0.CO;2-H
JPred: a consensus secondary structure prediction server, Bioinformatics, vol.14, issue.10, pp.892-893, 1998. ,
DOI : 10.1093/bioinformatics/14.10.892
Molecular Recognition in Biomolecules Studied by Statistical-Mechanical Integral-Equation Theory of Liquids, The Journal of Physical Chemistry B, vol.113, issue.4, pp.873-886, 2009. ,
DOI : 10.1021/jp807068k
Three-Dimensional Molecular Theory of Solvation Coupled with Molecular Dynamics in Amber, Journal of Chemical Theory and Computation, vol.6, issue.3, pp.607-624, 2010. ,
DOI : 10.1021/ct900460m
The Hydration of Globular Proteins as Derived from Volume and Compressibility Measurements: Cross Correlating Thermodynamic and Structural Data, Journal of Molecular Biology, vol.260, issue.4, pp.588-603, 1996. ,
DOI : 10.1006/jmbi.1996.0423
Exploring protein native states and large-scale conformational changes with a modified generalized born model, Proteins: Structure, Function, and Bioinformatics, vol.12, issue.2, pp.383-394, 2004. ,
DOI : 10.1002/prot.20033
Semianalytical treatment of solvation for molecular mechanics and dynamics, Journal of the American Chemical Society, vol.112, issue.16, pp.6127-6129, 1990. ,
DOI : 10.1021/ja00172a038
Brownian motion in a field of force and the diffusion model of chemical reactions, Physica, vol.7, issue.4, pp.284-304, 1940. ,
DOI : 10.1016/S0031-8914(40)90098-2
Solvent viscosity dependence of the folding rate of a small protein: Distributed computing study, Journal of Computational Chemistry, vol.79, issue.12, pp.1432-1436, 2003. ,
DOI : 10.1002/jcc.10297
Recent advances in implicit solvent-based methods for biomolecular simulations, Current Opinion in Structural Biology, vol.18, issue.2, pp.140-148, 2008. ,
DOI : 10.1016/j.sbi.2008.01.003
Treating Entropy and Conformational Changes in Implicit Solvent Simulations of Small Molecules, The Journal of Physical Chemistry B, vol.112, issue.3, pp.938-946, 2008. ,
DOI : 10.1021/jp0764384
Small Molecule Hydration Free Energies in Explicit Solvent: An Extensive Test of Fixed-Charge Atomistic Simulations, Journal of Chemical Theory and Computation, vol.5, issue.2, pp.350-358, 2009. ,
DOI : 10.1021/ct800409d
Solvation forces on biomolecular structures: A comparison of explicit solvent and Poisson-Boltzmann models, Journal of Computational Chemistry, vol.55, issue.13, pp.1801-1801, 2004. ,
DOI : 10.1002/jcc.20089
Converging free energy estimates: MM-PB(GB)SA studies on the protein-protein complex Ras-Raf, Journal of Computational Chemistry, vol.3, issue.2, pp.238-250, 2004. ,
DOI : 10.1002/jcc.10379
On the Nonpolar Hydration Free Energy of Proteins:?? Surface Area and Continuum Solvent Models for the Solute???Solvent Interaction Energy, Journal of the American Chemical Society, vol.125, issue.31, pp.9523-9530, 2003. ,
DOI : 10.1021/ja029833a
Assessing implicit models for nonpolar mean solvation forces: The importance of dispersion and volume terms, Proceedings of the National Academy of Sciences, vol.103, issue.22, pp.8331-8336, 2006. ,
DOI : 10.1073/pnas.0600118103
Effective Born radii in the generalized Born approximation: The importance of being perfect, Journal of Computational Chemistry, vol.45, issue.14, pp.1297-1304, 2002. ,
DOI : 10.1002/jcc.10126
Life and death of dried prokaryotes, Research in Microbiology, vol.153, issue.1, pp.7-12, 2002. ,
DOI : 10.1016/S0923-2508(01)01279-7
Desiccation tolerance of prokaryotes, Microbiol Rev, vol.58, pp.755-805, 1994. ,
Glass Formation and Desiccation Tolerance in Seeds, PLANT PHYSIOLOGY, vol.96, issue.1, pp.302-304, 1991. ,
DOI : 10.1104/pp.96.1.302
The continuing conundrum of the LEA proteins, Naturwissenschaften, vol.32, issue.Database issue, pp.791-812, 2007. ,
DOI : 10.1007/s00114-007-0254-y
Basic local alignment search tool, Journal of Molecular Biology, vol.215, issue.3, pp.403-410, 1990. ,
DOI : 10.1016/S0022-2836(05)80360-2
Comparative protein modeling by satisfaction of spatial restraints, Acta Crystallographica Section A Foundations of Crystallography, vol.52, issue.a1, pp.779-815, 1993. ,
DOI : 10.1107/S0108767396095578
A graph-theory algorithm for rapid protein side-chain prediction, Protein Science, vol.311, issue.9, pp.2001-2014, 2003. ,
DOI : 10.1110/ps.03154503
IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content, Bioinformatics, vol.21, issue.16, pp.3433-3434, 2005. ,
DOI : 10.1093/bioinformatics/bti541
Predicting intrinsic disorder from amino acid sequence, Proteins: Structure, Function, and Genetics, vol.10, issue.S6, pp.566-572, 2003. ,
DOI : 10.1002/prot.10532
Self-consistent description of a metal???water interface by the Kohn???Sham density functional theory and the three-dimensional reference interaction site model, The Journal of Chemical Physics, vol.110, issue.20, pp.10095-10112, 1999. ,
DOI : 10.1063/1.478883
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features, Biopolymers, vol.33, issue.12, pp.2577-2637, 1983. ,
DOI : 10.1002/bip.360221211
PDB-REPRDB: a database of representative protein chains from the Protein Data Bank (PDB) in 2003, Nucleic Acids Research, vol.31, issue.1, pp.492-493, 2003. ,
DOI : 10.1093/nar/gkg022
Performance comparison of generalized born and Poisson methods in the calculation of electrostatic solvation energies for protein structures, Journal of Computational Chemistry, vol.125, issue.2, pp.265-284, 2004. ,
DOI : 10.1002/jcc.10378
An efficient newton-like method for molecular mechanics energy minimization of large molecules, Journal of Computational Chemistry, vol.23, issue.7, pp.1016-1024, 1987. ,
DOI : 10.1002/jcc.540080710