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Chromosome folding and prophage activation reveal specific genomic architecture for intestinal bacteria

 Quentin Lamy-Besnier , Amaury Bignaud , Julian R Garneau , Marie Titecat , Devon E Conti , et al.
Microbiome, 2023, 11 (1), pp.111. ⟨10.1186/s40168-023-01541-x⟩
Article dans une revue pasteur-04158849v1
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The silencing factor Sir3 is a molecular bridge that sticks together distant loci

 Myriam Ruault , Vittore F Scolari , Luciana Lazar-Stefanita , Antoine Hocher , Isabelle Loïodice , et al.
2020
Pré-publication, Document de travail hal-03013702v1
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Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.

 Martial Marbouty , Antoine Le gall , Diego I Cattoni , Axel Cournac , Alan Koh , et al.
Molecular Cell, 2015, 59 (4), pp.588-602. ⟨10.1016/j.molcel.2015.07.020⟩
Article dans une revue pasteur-01419993v1
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Gene level resolution of bacteria and archaea genome folding

 Charlotte Cockram , Agnès Thierry , Roxane Lestini , Romain Koszul
2021
Pré-publication, Document de travail hal-03106900v1
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Sir3 mediates long-range chromosome interactions in budding yeast

 Myriam Ruault , Vittore F Scolari , Luciana Lazar-Stefanita , Antoine Hocher , Isabelle Loïodice , et al.
Genome Research, 2021, 31 (3), pp.411-425. ⟨10.1101/gr.267872.120⟩
Article dans une revue hal-03169421v1
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Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin

 Pierrick Moreau , Axel Cournac , Gianna Aurora Palumbo , Martial Marbouty , Shogofa Mortaza , et al.
Nature Communications, 2018, 9 (1), pp.4268. ⟨10.1038/s41467-018-06739-4⟩
Article dans une revue pasteur-02866759v1
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Nucleosome positioning on large tandem DNA repeats of the ’601’ sequence engineered in Saccharomyces cerevisiae

 Astrid Lancrey , Alexandra Joubert , Evelyne Duvernois-Berthet , Etienne Routhier , Saurabh Raj , et al.
Journal of Molecular Biology, 2022, ⟨10.1016/j.jmb.2022.167497⟩
Article dans une revue hal-03343705v2
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Evidence for a dual role of actin in regulating chromosome organization and dynamics in yeast.

 Maya Spichal , Alice Brion , Sébastien Herbert , Axel Cournac , Martial Marbouty , et al.
Journal of Cell Science, 2016, 129 (4), pp.681-92. ⟨10.1242/jcs.175745⟩
Article dans une revue pasteur-01419905v1
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Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization

 Charlotte Cockram , Agnès Thierry , Aurore Gorlas , Roxane Lestini , Romain Koszul
Molecular Cell, 2021, 81 (3), pp.459-472.e10. ⟨10.1016/j.molcel.2020.12.013⟩
Article dans une revue hal-03379787v1
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Serological signatures of SARS-CoV-2 infection: Implications for antibody-based diagnostics

 Jason Rosado , Stéphane Pelleau , Charlotte Cockram , Sarah Hélène Merkling , Narimane Nekkab , et al.
2020
Pré-publication, Document de travail pasteur-02569149v2
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Absence of chromosome axis proteins recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri

 Sylvain Legrand , Asma Saifudeen , Hélène Bordelet , Julien Vernerey , Arnaud Guille , et al.
2023
Pré-publication, Document de travail hal-04300727v1
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Extended sister-chromosome catenation leads to massive reorganization of the E. coli genome

 Brenna Conin , Ingrid Billault-Chaumartin , Hafez El Sayyed , Nicole Quenech'Du , Charlotte Cockram , et al.
Nucleic Acids Research, 2022, 50 (5), pp.2635-2650. ⟨10.1093/nar/gkac105⟩
Article dans une revue pasteur-03689317v1
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Karyotype engineering reveals spatio-temporal control of replication firing and gene contacts

 Luciana Lazar-Stefanita , Jingchuan Luo , Remi Montagne , Agnes Thierry , Xiaoji Sun , et al.
Cell Genomics, 2022, 2 (8), pp.100163. ⟨10.1016/j.xgen.2022.100163⟩
Article dans une revue hal-03930009v1
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Multiplex assays for the identification of serological signatures of SARS-CoV-2 infection: an antibody-based diagnostic and machine learning study

 Jason Rosado , Stéphane Pelleau , Charlotte A. Cockram , Sarah Hélène Merkling , Narimane Nekkab , et al.
The Lancet Microbe, 2021, 2 (2), pp.e60-e69. ⟨10.1016/S2666-5247(20)30197-X⟩
Article dans une revue hal-03128905v1
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Filling annotation gaps in yeast genomes using genome-wide contact maps.

 Hervé Marie-Nelly , Martial Marbouty , Axel Cournac , Gianni Liti , Gilles Fischer , et al.
Bioinformatics, 2014, 30 (15), pp.2105-13. ⟨10.1093/bioinformatics/btu162⟩
Article dans une revue pasteur-01488132v1
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Bacterial Membrane Vesicles as a Novel Strategy for Extrusion of Antimicrobial Bismuth Drug in Helicobacter pylori

 Sumith Kumar , Christine Schmitt , Olivier Gorgette , Martial Marbouty , Magalie Duchateau , et al.
mBio, 2022, 13 (5), pp.e0163322. ⟨10.1128/mbio.01633-22⟩
Article dans une revue pasteur-04093078v1
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Perspectives on Chromosome Organization

 Marcelo Nollmann , Romain Koszul
Journal of Molecular Biology, 2020, 432 (3), pp.635-637. ⟨10.1016/j.jmb.2019.12.021⟩
Article dans une revue pasteur-02868093v1
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Spatial reorganization of telomeres in long-lived quiescent cells

 Micol Guidi , Myriam Ruault , Martial Marbouty , Isabelle Loïodice , Axel Cournac , et al.
Genome Biology, 2015, 16 (1), pp.206. ⟨10.1186/s13059-015-0766-2⟩
Article dans une revue hal-01206018v1
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